RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 KRT79Q5XKE5 535 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 HAUS3Q68CZ6 603 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 TAS1R1Q7RTX1 841 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 KCTD17Q8N5Z5 321 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 C4orf32Q8N8J7 132 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 URGCPQ8TCY9 931 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 PIGOQ8TEQ8 1089 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 AK8Q96MA6 479 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 ZFP42Q96MM3 310 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 NXF3Q9H4D5 531 aaKnown RBP12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 GPRC5CQ9NQ84 441 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 CHMP5Q9NZZ3 219 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 PRG3Q9Y2Y8 225 aaPredicted RBP12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 IRAK3Q9Y616 596 aa12.2□□□□□ -0.46
TMEM39A-211ENST00000491685 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 VWA8A3KMH1 1905 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 CNTNAP2Q9UHC6 1331 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 CACNA1HO95180 2353 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 INO80B-WBP1J3KQ70 363 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 NRP1O14786 923 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 ASAP2O43150 1006 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 USO1O60763 962 aaKnown RBP12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 MED24O75448 989 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 ERLIN2O94905 339 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 YEATS4O95619 227 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 CNPP09543 421 aaKnown RBP12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 SPATA31C1P0DKV0 1188 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 ITGA4P13612 1032 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 ARF4P18085 180 aaPredicted RBP12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 MUTP22033 750 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 LONP1P36776 959 aaKnown RBP12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 UBA7P41226 1012 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 SCNN1GP51170 649 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 KRT85P78386 507 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 CEBPZQ03701 1054 aaKnown RBP12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 SIGLEC14Q08ET2 396 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 NBR1Q14596 966 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 SLC39A14Q15043 492 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 TMC5Q6UXY8 1006 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 COLGALT2Q8IYK4 626 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 FBXL6Q8N531 539 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 KLHL5Q96PQ7 755 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 GAD1Q99259 594 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 TMEM175Q9BSA9 504 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 APOL6Q9BWW8 343 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 SCAND2PQ9GZW5 306 aaPredicted RBP12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 IRF2BPLQ9H1B7 796 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 POLR3FQ9H1D9 316 aaPredicted RBP12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 TUFT1Q9NNX1 390 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 CACNG4Q9UBN1 327 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 CLIC4Q9Y696 253 aa12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 ZFHX2Q9C0A1 2572 aaPredicted RBP12.19□□□□□ -0.46
TMEM39A-211ENST00000491685 ARL5CA6NH57 179 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 TTLL13PA6NNM8 815 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 C2CD2LO14523 706 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 SPTLC2O15270 562 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 INPPL1O15357 1258 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 SLC26A4O43511 780 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 LILRB3O75022 631 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 PPP6R2O75170 966 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 DGAT1O75907 488 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 EFEMP2O95967 443 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 EDN1P05305 212 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 ASGR2P07307 311 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 TXLNAP40222 546 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 CLCN4P51793 760 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 ITIH3Q06033 890 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 DSC1Q08554 894 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 NCBP1Q09161 790 aaKnown RBP12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 PCBP1Q15365 356 aaKnown RBP eCLIP12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 KIAA1841Q6NSI8 718 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 CES5AQ6NT32 575 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 FAM173BQ6P4H8 233 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 MAEAQ7L5Y9 396 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 RNF168Q8IYW5 571 aaPredicted RBP12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 TMEM87AQ8NBN3 555 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 KREMEN2Q8NCW0 462 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 GSTCDQ8NEC7 633 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 BSNDQ8WZ55 320 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 CALML4Q96GE6 196 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 CDK5RAP3Q96JB5 506 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 B3GALT6Q96L58 329 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 CCDC43Q96MW1 224 aaKnown RBP12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 FAM193BQ96PV7 902 aaPredicted RBP12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 NACC1Q96RE7 527 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 HERC2P3Q9BVR0 1158 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 CSRNP2Q9H175 543 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 ANKEF1Q9NU02 776 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 DZANK1Q9NVP4 752 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 CCDC39Q9UFE4 941 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 FAN1Q9Y2M0 1017 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 SRPRBQ9Y5M8 271 aaKnown RBP12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 DOCK8Q8NF50 2099 aa12.18□□□□□ -0.46
TMEM39A-211ENST00000491685 VWA3AA6NCI4 1184 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 NPTXRO95502 500 aa12.17□□□□□ -0.46
TMEM39A-211ENST00000491685 MYBP10242 640 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms