RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 MEIS3P2A8K0S8 358 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 DKC1O60832 514 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 MAFO75444 373 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 RFPL2O75678 378 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 NCLP19338 710 aaKnown RBP12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 OR1G1P47890 313 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 USP11P51784 963 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 PCBP1Q15365 356 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 LRCH2Q5VUJ6 765 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 CREB3L3Q68CJ9 461 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 ZBTB44Q8NCP5 570 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 CCDC148Q8NFR7 591 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 ZNF707Q96C28 371 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 NLRP4Q96MN2 994 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 FAM126AQ9BYI3 521 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 C22orf23Q9BZE7 217 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 FOXQ1Q9C009 403 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 PPME1Q9Y570 386 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 TDRD15B5MCY1 1934 aaKnown RBP12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 IGSF10Q6WRI0 2623 aa12.48□□□□□ -0.41
CLCNKA-206ENST00000491433 MSH4O15457 936 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 CHMP2AO43633 222 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 POMCP01189 267 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 HNRNPA1P09651 372 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 ITGA4P13612 1032 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 FSHRP23945 695 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 CSTF1Q05048 431 aaKnown RBP12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 NCBP1Q09161 790 aaKnown RBP12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 DRP2Q13474 957 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 UBXN2BQ14CS0 331 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 MLF2Q15773 248 aaPredicted RBP12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 USP41Q3LFD5 358 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 ZBTB41Q5SVQ8 909 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 PRR23CQ6ZRP0 262 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 COLGALT2Q8IYK4 626 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 RNF168Q8IYW5 571 aaPredicted RBP12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 ADAM32Q8TC27 787 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 SLC5A5Q92911 643 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 LENG9Q96B70 501 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 UNC45AQ9H3U1 944 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 PRG3Q9Y2Y8 225 aaPredicted RBP12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
CLCNKA-206ENST00000491433 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 B4GALT3O60512 393 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 LILRB5O75023 590 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 ZMYND10O75800 440 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 GLULP15104 373 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 AXLP30530 894 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 NRLP54845 237 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 GPC5P78333 572 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 AKAP17AQ02040 695 aaKnown RBP12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 PPP2R5DQ14738 602 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 UGCGQ16739 394 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 SLC44A4Q53GD3 710 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 LAIR1Q6GTX8 287 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 PALB2Q86YC2 1186 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 SLC7A3Q8WY07 619 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 CCDC51Q96ER9 411 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 HNRNPABQ99729 332 aaKnown RBP12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 ADAM33Q9BZ11 813 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 LSG1Q9H089 658 aaKnown RBP12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 IFT122Q9HBG6 1241 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 CHST7Q9NS84 486 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 SEMA4GQ9NTN9 838 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 MARCH5Q9NX47 278 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 CDH7Q9ULB5 785 aa12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 MRPS17Q9Y2R5 130 aaKnown RBP12.46□□□□□ -0.41
CLCNKA-206ENST00000491433 MYO18BQ8IUG5 2567 aa12.46□□□□□ -0.42
CLCNKA-206ENST00000491433 FAM170BA6NMN3 283 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 ASAP2O43150 1006 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 TGM5O43548 720 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 XYLBO75191 536 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 ERLIN2O94905 339 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 EFEMP2O95967 443 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 RETP07949 1114 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 HOXA9P31269 272 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 RPS9P46781 194 aaKnown RBP12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 PSMC5P62195 406 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 SNW1Q13573 536 aaKnown RBP12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 CSRP2Q16527 193 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 LIN9Q5TKA1 542 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 LILRA6Q6PI73 481 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 DHX32Q7L7V1 743 aaKnown RBP12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 PDZD3Q86UT5 571 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 TCP11Q8WWU5 503 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 PSPC1Q8WXF1 523 aaKnown RBP12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 CEP89Q96ST8 783 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 IER2Q9BTL4 223 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 LTB4R2Q9NPC1 389 aa12.45□□□□□ -0.42
CLCNKA-206ENST00000491433 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 PRPF3O43395 683 aaKnown RBP12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 GDF9O60383 454 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 PSMD10O75832 226 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms