RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 KRBA2Q6ZNG9 492 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 SLC39A11Q8N1S5 342 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 ASAP3Q8TDY4 903 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.33
GGPS1-207ENST00000489692 CPB2Q96IY4 423 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 TRIM5Q9C035 493 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 RSAD1Q9HA92 442 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 XPNPEP1Q9NQW7 623 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 PCDHB6Q9Y5E3 794 aa12.98□□□□□ -0.33
GGPS1-207ENST00000489692 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-207ENST00000489692 MEIS3P2A8K0S8 358 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 HIDE1A8MVS5 230 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 IKBKBO14920 756 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 CXCL14O95715 111 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 ALADP13716 330 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 CCT6AP40227 531 aaKnown RBP12.97□□□□□ -0.33
GGPS1-207ENST00000489692 TPM4P67936 248 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 RBM10P98175 930 aaKnown RBP12.97□□□□□ -0.33
GGPS1-207ENST00000489692 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 SMAD2Q15796 467 aaKnown RBP12.97□□□□□ -0.33
GGPS1-207ENST00000489692 HAUS3Q68CZ6 603 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 NOTUMQ6P988 496 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 VPS52Q8N1B4 723 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 RSPH1Q8WYR4 309 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 CCDC34Q96HJ3 373 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 NACC1Q96RE7 527 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 TRAIPQ9BWF2 469 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 TUFT1Q9NNX1 390 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 CLEC1BQ9P126 229 aa12.97□□□□□ -0.33
GGPS1-207ENST00000489692 USP15Q9Y4E8 981 aaPredicted RBP12.97□□□□□ -0.33
GGPS1-207ENST00000489692 CNTNAP2Q9UHC6 1331 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 CARNS1A5YM72 827 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 FSCN2O14926 492 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 TSPAN1O60635 241 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 ZNF623O75123 536 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 MED24O75448 989 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 GLP2RO95838 553 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 POMCP01189 267 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
GGPS1-207ENST00000489692 PTENP60484 403 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 ORC2Q13416 577 aaPredicted RBP12.96□□□□□ -0.33
GGPS1-207ENST00000489692 CAPSQ13938 189 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 DHX8Q14562 1220 aaKnown RBP12.96□□□□□ -0.33
GGPS1-207ENST00000489692 POTEGQ6S5H5 508 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 CATSPER3Q86XQ3 398 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 ZBTB8OSQ8IWT0 167 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 AOPEPQ8N6M6 819 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 TRIML1Q8N9V2 468 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 CNNM3Q8NE01 707 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 MCPH1Q8NEM0 835 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 MSLNLQ96KJ4 702 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 CLIC6Q96NY7 704 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 PYM1Q9BRP8 204 aaKnown RBP12.96□□□□□ -0.33
GGPS1-207ENST00000489692 RAB34Q9BZG1 259 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 GPRC5CQ9NQ84 441 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 KANSL3Q9P2N6 904 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 RAPGEFL1Q9UHV5 662 aa12.96□□□□□ -0.33
GGPS1-207ENST00000489692 TCF20Q9UGU0 1960 aaKnown RBP12.95□□□□□ -0.34
GGPS1-207ENST00000489692 PI4K2BG5E9Z4 385 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 DCXO43602 365 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 ALDH2P05091 517 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 GALTP07902 379 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 SPATA31C1P0DKV0 1188 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 GLRA2P23416 452 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 AXLP30530 894 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 HOXA11P31270 313 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-207ENST00000489692 ARL2P36404 184 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 OR1G1P47890 313 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 SLC11A1P49279 550 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 ATP2C1P98194 919 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-207ENST00000489692 COASYQ13057 564 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 PCBP1Q15365 356 aaKnown RBP eCLIP12.95□□□□□ -0.34
GGPS1-207ENST00000489692 DPCR1Q3MIW9 517 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 PADI6Q6TGC4 694 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 AGMOQ6ZNB7 445 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 CDR2LQ86X02 465 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-207ENST00000489692 ZNF280BQ86YH2 543 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 MRPL43Q8N983 215 aaKnown RBP12.95□□□□□ -0.34
GGPS1-207ENST00000489692 SMRP1Q8NCR6 262 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 DEPTORQ8TB45 409 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 AUTS2Q8WXX7 1259 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 CASP10Q92851 521 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 CCDC51Q96ER9 411 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 RPGRIP1Q96KN7 1286 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 LRFN3Q9BTN0 628 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 POLR3CQ9BUI4 534 aaPredicted RBP12.95□□□□□ -0.34
GGPS1-207ENST00000489692 EIF2AQ9BY44 585 aaKnown RBP12.95□□□□□ -0.34
GGPS1-207ENST00000489692 CSRNP2Q9H175 543 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 UBN1Q9NPG3 1134 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 SPTLC3Q9NUV7 552 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 DNAJB4Q9UDY4 337 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 LRWD1Q9UFC0 647 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 PARP2Q9UGN5 583 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 FAN1Q9Y2M0 1017 aa12.95□□□□□ -0.34
GGPS1-207ENST00000489692 PRG3Q9Y2Y8 225 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms