RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.07□□□□□ -0.96
SF1-218ENST00000489544 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.07□□□□□ -0.96
SF1-218ENST00000489544 TBKBP1A7MCY6 615 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 MEFVO15553 781 aaPredicted RBP9.07□□□□□ -0.96
SF1-218ENST00000489544 TGFB1I1O43294 461 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 TLL1O43897 1013 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 ZNF623O75123 536 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 TOM1L1O75674 476 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 DGKIO75912 1065 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 PIGRP01833 764 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 MYL1P05976 194 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 BMP6P22004 513 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 ADSSP30520 456 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 MATR3P43243 847 aaKnown RBP eCLIP9.07□□□□□ -0.96
SF1-218ENST00000489544 KCNB1Q14721 858 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 ZPBP2Q6X784 338 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 MRPL10Q7Z7H8 261 aaKnown RBP9.07□□□□□ -0.96
SF1-218ENST00000489544 SYCP3Q8IZU3 236 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 TMEM130Q8N3G9 435 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 SLC17A8Q8NDX2 589 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 SPATA20Q8TB22 786 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 PHOSPHO2Q8TCD6 241 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 ZNF507Q8TCN5 953 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 KCNN1Q92952 543 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 CCDC51Q96ER9 411 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 CCDC34Q96HJ3 373 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 ZFP42Q96MM3 310 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 CASD1Q96PB1 797 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 YME1L1Q96TA2 773 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 GAD1Q99259 594 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 CBWD1Q9BRT8 395 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 TRAIPQ9BWF2 469 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 NUP62CLQ9H1M0 184 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 PCIF1Q9H4Z3 704 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 RC3H2Q9HBD1 1191 aaKnown RBP9.07□□□□□ -0.96
SF1-218ENST00000489544 MIOSQ9NXC5 875 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 PARP2Q9UGN5 583 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 INPP5FQ9Y2H2 1132 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 TTC3P53804 2025 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 COL4A6Q14031 1691 aa9.07□□□□□ -0.96
SF1-218ENST00000489544 LAMA2P24043 3122 aaKnown RBP9.07□□□□□ -0.96
SF1-218ENST00000489544 A0A0B4J269 797 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 GOLGA8IPA6NC78 632 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 GOLGA8JA6NMD2 632 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 CLIC2O15247 247 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 EIF3DO15371 548 aaKnown RBP eCLIP9.06□□□□□ -0.96
SF1-218ENST00000489544 CLDN3O15551 220 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 B4GALT3O60512 393 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 OFD1O75665 1012 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 RECQL4O94761 1208 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 SMC2O95347 1197 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 POMCP01189 267 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 CA3P07451 260 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 STAG3L1P0CL83 205 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 ITGA4P13612 1032 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 MLH1P40692 756 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 TNFSF9P41273 254 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 ACOT2P49753 483 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 RAB27AP51159 221 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 HTRA4P83105 476 aaPredicted RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 SPAG1Q07617 926 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 MCL1Q07820 350 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 PSMD2Q13200 908 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 ALCAMQ13740 583 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 NOLC1Q14978 699 aaKnown RBP eCLIP9.06□□□□□ -0.96
SF1-218ENST00000489544 KNOP1Q1ED39 458 aaKnown RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 BMT2Q1RMZ1 405 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 LRIT3Q3SXY7 679 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 LRRC55Q6ZSA7 311 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 ELOA2Q8IYF1 753 aaPredicted RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 NOC3LQ8WTT2 800 aaKnown RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 CCDC47Q96A33 483 aaKnown RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 ZNF689Q96CS4 500 aaPredicted RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 HVCN1Q96D96 273 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 SAAL1Q96ER3 474 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 GSDMAQ96QA5 445 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 RAD9AQ99638 391 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 ADPGKQ9BRR6 497 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 MSTO1Q9BUK6 570 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 ELAC1Q9H777 363 aaKnown RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 CERS4Q9HA82 394 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 RSAD1Q9HA92 442 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 TMEM63CQ9P1W3 806 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 CACNG4Q9UBN1 327 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 HOOK1Q9UJC3 728 aaKnown RBP9.06□□□□□ -0.96
SF1-218ENST00000489544 PLAGL2Q9UPG8 496 aa9.06□□□□□ -0.96
SF1-218ENST00000489544 A0A1W2PPC1 479 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 LINC01553A4QN01 128 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 FAM189A1O60320 539 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 EOMESO95936 686 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 MCF2P10911 925 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 SKIP12755 728 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 DNAJB2P25686 324 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 PBX3P40426 434 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 PRCPP42785 496 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 SCNN1GP51170 649 aa9.05□□□□□ -0.96
SF1-218ENST00000489544 PMS1P54277 932 aaKnown RBP9.05□□□□□ -0.96
SF1-218ENST00000489544 WNT7BP56706 349 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms