RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 DNAJB1P25685 340 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 AFF1P51825 1210 aaKnown RBP19.04■□□□□ 0.64
MDC1-206ENST00000489540 AMPD3Q01432 767 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 CAMK1Q14012 370 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 RESP18Q5W5W9 173 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 PDE12Q6L8Q7 609 aaKnown RBP19.04■□□□□ 0.64
MDC1-206ENST00000489540 ZPBP2Q6X784 338 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 ZNF280BQ86YH2 543 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 FAM178BQ8IXR5 827 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 SLC39A11Q8N1S5 342 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 MRPS27Q92552 414 aaKnown RBP19.04■□□□□ 0.64
MDC1-206ENST00000489540 TMEM175Q9BSA9 504 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 TCHPQ9BT92 498 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 GBP3Q9H0R5 595 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 TNMDQ9H2S6 317 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 SNTG2Q9NY99 539 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 SEL1LQ9UBV2 794 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 DDHD2O94830 711 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 GAP43P17677 238 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 PBX3P40426 434 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 E2F4Q16254 413 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 ADALQ6DHV7 355 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 PPP2R3CQ969Q6 453 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 DHX58Q96C10 678 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 DNAJC19Q96DA6 116 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 TLR9Q9NR96 1032 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 TBX20Q9UMR3 447 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 COG5Q9UP83 839 aa19.03■□□□□ 0.64
MDC1-206ENST00000489540 PRRC2BQ5JSZ5 2229 aaKnown RBP19.03■□□□□ 0.64
MDC1-206ENST00000489540 K7ENM7 598 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 POLR2DO15514 142 aaKnown RBP19.02■□□□□ 0.64
MDC1-206ENST00000489540 NCK2O43639 380 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 NR1I2O75469 434 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 TOM1L1O75674 476 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 MCF2P10911 925 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 PROZP22891 400 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 ZNF568Q3ZCX4 644 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 MPZL3Q6UWV2 235 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.02■□□□□ 0.64
MDC1-206ENST00000489540 GSTCDQ8NEC7 633 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 MICAL1Q8TDZ2 1067 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 TMEM169Q96HH4 297 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 ZFP42Q96MM3 310 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 RPS6KC1Q96S38 1066 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 ST6GALNAC4Q9H4F1 302 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 MAGEF1Q9HAY2 307 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 KBTBD4Q9NVX7 518 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 MIOSQ9NXC5 875 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 KLK14Q9P0G3 267 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 STK39Q9UEW8 545 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 FAN1Q9Y2M0 1017 aa19.02■□□□□ 0.64
MDC1-206ENST00000489540 NT5C1B-RDH14C9J2C7 533 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 CMA1P23946 247 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 GRM5P41594 1212 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 SLC11A1P49279 550 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 SCNN1GP51170 649 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 GTF2BQ00403 316 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 BMS1Q14692 1282 aaKnown RBP19.01■□□□□ 0.63
MDC1-206ENST00000489540 FNDC1Q4ZHG4 1894 aaPredicted RBP19.01■□□□□ 0.63
MDC1-206ENST00000489540 TCEAL5Q5H9L2 206 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 ZNF720Q7Z2F6 126 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 COLGALT2Q8IYK4 626 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 BICD1Q96G01 975 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 IGSF21Q96ID5 467 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 FIZ1Q96SL8 496 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 CCDC94Q9BW85 323 aaPredicted RBP19.01■□□□□ 0.63
MDC1-206ENST00000489540 CDT1Q9H211 546 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 DNAJB4Q9UDY4 337 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 KCNH3Q9ULD8 1083 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 RALGAPA2Q2PPJ7 1873 aa19.01■□□□□ 0.63
MDC1-206ENST00000489540 CLDN3O15551 220 aa19■□□□□ 0.63
MDC1-206ENST00000489540 RECQL4O94761 1208 aa19■□□□□ 0.63
MDC1-206ENST00000489540 IDEP14735 1019 aa19■□□□□ 0.63
MDC1-206ENST00000489540 NMT1P30419 496 aaKnown RBP19■□□□□ 0.63
MDC1-206ENST00000489540 YARSP54577 528 aaKnown RBP19■□□□□ 0.63
MDC1-206ENST00000489540 DSC1Q08554 894 aa19■□□□□ 0.63
MDC1-206ENST00000489540 GRIK3Q13003 919 aa19■□□□□ 0.63
MDC1-206ENST00000489540 HERC4Q5GLZ8 1057 aaPredicted RBP19■□□□□ 0.63
MDC1-206ENST00000489540 ZBTB33Q86T24 672 aa19■□□□□ 0.63
MDC1-206ENST00000489540 CCDC65Q8IXS2 484 aa19■□□□□ 0.63
MDC1-206ENST00000489540 ATXN2LQ8WWM7 1075 aaKnown RBP19■□□□□ 0.63
MDC1-206ENST00000489540 HLA-CQ95604 372 aa19■□□□□ 0.63
MDC1-206ENST00000489540 CHAMP1Q96JM3 812 aa19■□□□□ 0.63
MDC1-206ENST00000489540 NGRNQ9NPE2 291 aaKnown RBP19■□□□□ 0.63
MDC1-206ENST00000489540 PRDM6Q9NQX0 595 aa19■□□□□ 0.63
MDC1-206ENST00000489540 PANK4Q9NVE7 773 aa19■□□□□ 0.63
MDC1-206ENST00000489540 THEGQ9P2T0 379 aa19■□□□□ 0.63
MDC1-206ENST00000489540 GDAQ9Y2T3 454 aa19■□□□□ 0.63
MDC1-206ENST00000489540 FRMD3A2A2Y4 597 aa19■□□□□ 0.63
MDC1-206ENST00000489540 ABLIM1O14639 778 aa19■□□□□ 0.63
MDC1-206ENST00000489540 NRP1O14786 923 aa19■□□□□ 0.63
MDC1-206ENST00000489540 FSCN2O14926 492 aa19■□□□□ 0.63
MDC1-206ENST00000489540 PIGRP01833 764 aa19■□□□□ 0.63
MDC1-206ENST00000489540 IRS1P35568 1242 aa19■□□□□ 0.63
MDC1-206ENST00000489540 LIG4P49917 911 aa19■□□□□ 0.63
MDC1-206ENST00000489540 ERVFC1P60507 584 aa19■□□□□ 0.63
MDC1-206ENST00000489540 MCL1Q07820 350 aa19■□□□□ 0.63
MDC1-206ENST00000489540 CNNM4Q6P4Q7 775 aa19■□□□□ 0.63
MDC1-206ENST00000489540 DDX53Q86TM3 631 aaKnown RBP19■□□□□ 0.63
MDC1-206ENST00000489540 SFR1Q86XK3 245 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms