RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 FAM102BQ5T8I3 360 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 IER5Q5VY09 327 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 SWSAP1Q6NVH7 229 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 PDXDC1Q6P996 788 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 RRAGAQ7L523 313 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 PLPPR4Q7Z2D5 763 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 NPAS3Q8IXF0 933 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 IL31RAQ8NI17 732 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 CD99L2Q8TCZ2 262 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 DHX38Q92620 1227 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 GJA10Q969M2 543 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 SLC35C1Q96A29 364 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 JAKMIP2Q96AA8 810 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 PKNOX2Q96KN3 472 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 NAPGQ99747 312 aaPredicted RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 IFIH1Q9BYX4 1025 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 SMARCAD1Q9H4L7 1026 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 KMT5AQ9NQR1 393 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 CYP26B1Q9NR63 512 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 GABBR1Q9UBS5 961 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 MORF4L1Q9UBU8 362 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 NXF1Q9UBU9 619 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 LIMD1Q9UGP4 676 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 USP20Q9Y2K6 914 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 KIAA0100Q14667 2235 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 DNAJC25-GNG10A0A024R161 153 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 IGKV6D-21A0A0A0MT36 114 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 NPHP3-ACAD11A0A0J9YXS1 232 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 CCDC169A6NNP5 214 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 BTNL10A8MVZ5 291 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 RBAK-RBAKDNI3L0D1 243 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 MAGEB2O15479 319 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 TGFB1I1O43294 461 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 LILRB3O75022 631 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 FKTNO75072 461 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 CCNE2O96020 404 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 MYBP10242 640 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 UCHL3P15374 230 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 PRLRP16471 622 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 PRKCIP41743 596 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 VAMP7P51809 220 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 BPIFB4P59827 614 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 ERVK-9P63128 1117 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 ERVK-24P63145 666 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 PRKCEQ02156 737 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 POU5F1BQ06416 359 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 BFSP1Q12934 665 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 MAPK7Q13164 816 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 BMS1Q14692 1282 aaKnown RBP6.91□□□□□ -1.3
SF3A3-208ENST00000489537 PCBP1Q15365 356 aaKnown RBP eCLIP6.91□□□□□ -1.3
SF3A3-208ENST00000489537 FAM110CQ1W6H9 321 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 TDRD12Q587J7 1177 aaKnown RBP6.91□□□□□ -1.3
SF3A3-208ENST00000489537 DCAF17Q5H9S7 520 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-208ENST00000489537 CCDC122Q5T0U0 273 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 TREML2Q5T2D2 321 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 KLHDC7AQ5VTJ3 777 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 MRPL14Q6P1L8 145 aaKnown RBP6.91□□□□□ -1.3
SF3A3-208ENST00000489537 TRIM65Q6PJ69 517 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 SYT10Q6XYQ8 523 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 TRIM46Q7Z4K8 759 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 ZBTB8OSQ8IWT0 167 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 DEPTORQ8TB45 409 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 UBXN4Q92575 508 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 RUBCNQ92622 972 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 FOXJ1Q92949 421 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 SECISBP2LQ93073 1101 aaKnown RBP6.91□□□□□ -1.3
SF3A3-208ENST00000489537 HPS3Q969F9 1004 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 CDK15Q96Q40 435 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 PAGR1Q9BTK6 254 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 LSM14BQ9BX40 385 aaKnown RBP6.91□□□□□ -1.3
SF3A3-208ENST00000489537 STK33Q9BYT3 514 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 FAM207AQ9NSI2 230 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-208ENST00000489537 TBX20Q9UMR3 447 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 JRKLQ9Y4A0 524 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 ASTN1O14525 1302 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 EMSYQ7Z589 1322 aa6.91□□□□□ -1.3
SF3A3-208ENST00000489537 MANSC4A6NHS7 340 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 ZNF233A6NK53 670 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 LRRC53A6NM62 1247 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 BTBD19C9JJ37 291 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 K7ERI5 159 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 PJA2O43164 708 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 HBP1O60381 514 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 ATP9AO75110 1047 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 LGR5O75473 907 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 AKAP3O75969 853 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 URI1O94763 535 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 FARP2O94887 1054 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 UPP2O95045 317 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 PIGRP01833 764 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 RPLP2P05387 115 aaKnown RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 TCP1P17987 556 aaKnown RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 TMOD1P28289 359 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 NMT1P30419 496 aaKnown RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 NPTX2P47972 431 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 FMO5P49326 533 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 LIG4P49917 911 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 KIF11P52732 1056 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 MFAP3P55082 362 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms