RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 PRR23AA6NEV1 266 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 ZBTB39O15060 712 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 LYPLA2O95372 231 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 MBTD1Q05BQ5 628 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 SLC27A1Q6PCB7 646 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 TAS1R1Q7RTX1 841 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 GPR65Q8IYL9 337 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 SNX27Q96L92 541 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 NFKBIZQ9BYH8 718 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 TTC12Q9H892 705 aaPredicted RBP13.24□□□□□ -0.29
SFXN3-207ENST00000489434 GJB4Q9NTQ9 266 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.24□□□□□ -0.29
SFXN3-207ENST00000489434 WNT16Q9UBV4 365 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 TPCN1Q9ULQ1 816 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 HES2Q9Y543 173 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 PLXNA3P51805 1871 aa13.24□□□□□ -0.29
SFXN3-207ENST00000489434 EP300Q09472 2414 aaPredicted RBP13.24□□□□□ -0.29
SFXN3-207ENST00000489434 ZMYM2Q9UBW7 1377 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 ZNF292O60281 2723 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 NEMFO60524 1076 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 XRCC6P12956 609 aaKnown RBP eCLIP13.23□□□□□ -0.29
SFXN3-207ENST00000489434 ARF4P18085 180 aaPredicted RBP13.23□□□□□ -0.29
SFXN3-207ENST00000489434 ARL2P36404 184 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 FOXK2Q01167 660 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 GRIK3Q13003 919 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 CAPSQ13938 189 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 TRIM29Q14134 588 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 ASCL5Q7RTU5 278 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 FRMD5Q7Z6J6 570 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 PALB2Q86YC2 1186 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 CCDC105Q8IYK2 499 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 HSD17B14Q9BPX1 270 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 NXF3Q9H4D5 531 aaKnown RBP13.23□□□□□ -0.29
SFXN3-207ENST00000489434 XPNPEP1Q9NQW7 623 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 CHST7Q9NS84 486 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 ZDHHC7Q9NXF8 308 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 FNIP2Q9P278 1114 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 EPS15L1Q9UBC2 864 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 MYO15AQ9UKN7 3530 aa13.23□□□□□ -0.29
SFXN3-207ENST00000489434 MTCL1Q9Y4B5 1905 aaKnown RBP13.23□□□□□ -0.29
SFXN3-207ENST00000489434 SF3B1O75533 1304 aaKnown RBP eCLIP13.22□□□□□ -0.29
SFXN3-207ENST00000489434 LRRIQ4A6NIV6 560 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 TADA2AO75478 443 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 RFPL2O75678 378 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 NPTXRO95502 500 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 SPATA31D3P0C874 917 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 MYBP10242 640 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 AKAP5P24588 427 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 TXKP42681 527 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 NR5A1Q13285 461 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 CWF19L1Q69YN2 538 aaKnown RBP13.22□□□□□ -0.29
SFXN3-207ENST00000489434 FUT10Q6P4F1 479 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 SPATA31D4Q6ZUB0 917 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 ZBTB8OSQ8IWT0 167 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 RNF168Q8IYW5 571 aaPredicted RBP13.22□□□□□ -0.29
SFXN3-207ENST00000489434 DTWD2Q8NBA8 298 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 MCPH1Q8NEM0 835 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 FEZF2Q8TBJ5 459 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 ASAP3Q8TDY4 903 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 RIN2Q8WYP3 895 aaPredicted RBP13.22□□□□□ -0.29
SFXN3-207ENST00000489434 POLR3FQ9H1D9 316 aaPredicted RBP13.22□□□□□ -0.29
SFXN3-207ENST00000489434 PARP2Q9UGN5 583 aa13.22□□□□□ -0.29
SFXN3-207ENST00000489434 DOCK8Q8NF50 2099 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 A0A1B0GUA9 196 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 TGM5O43548 720 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 EFEMP2O95967 443 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 CFHP08603 1231 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 SRFP11831 508 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 NPR3P17342 541 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 GLRA2P23416 452 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 RARRES1P49788 294 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 ANAPC15P60006 121 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.29
SFXN3-207ENST00000489434 ANGPT1Q15389 498 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 AMHR2Q16671 573 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 EARS2Q5JPH6 523 aaKnown RBP13.21□□□□□ -0.29
SFXN3-207ENST00000489434 SLC44A3Q8N4M1 653 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 PIGOQ8TEQ8 1089 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 B3GALT6Q96L58 329 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 PRIMPOLQ96LW4 560 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 GPR62Q9BZJ7 368 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 PRKD2Q9BZL6 878 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 PRMT7Q9NVM4 692 aaPredicted RBP13.21□□□□□ -0.29
SFXN3-207ENST00000489434 MIOSQ9NXC5 875 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 KLK14Q9P0G3 267 aa13.21□□□□□ -0.29
SFXN3-207ENST00000489434 ZFP37Q9Y6Q3 630 aaPredicted RBP13.21□□□□□ -0.29
SFXN3-207ENST00000489434 F8W810 466 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 B4GALT5O43286 388 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 PI15O43692 258 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 NARSO43776 548 aaKnown RBP13.2□□□□□ -0.3
SFXN3-207ENST00000489434 USO1O60763 962 aaKnown RBP13.2□□□□□ -0.3
SFXN3-207ENST00000489434 N4BP1O75113 896 aaKnown RBP13.2□□□□□ -0.3
SFXN3-207ENST00000489434 CTDNEP1O95476 244 aa13.2□□□□□ -0.3
SFXN3-207ENST00000489434 ELAVL2Q12926 359 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms