RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SEC63Q9UGP8 760 aaKnown RBP10.39□□□□□ -0.75
SSBP1-212ENST00000489378 DPP7Q9UHL4 492 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 CDH7Q9ULB5 785 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 FAN1Q9Y2M0 1017 aa10.39□□□□□ -0.75
SSBP1-212ENST00000489378 MAFBQ9Y5Q3 323 aaPredicted RBP10.39□□□□□ -0.75
SSBP1-212ENST00000489378 ZFP37Q9Y6Q3 630 aaPredicted RBP10.39□□□□□ -0.75
SSBP1-212ENST00000489378 MEIS1O00470 390 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 NRP1O14786 923 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 MAGEB2O15479 319 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 DHX15O43143 795 aaKnown RBP10.38□□□□□ -0.75
SSBP1-212ENST00000489378 TGM5O43548 720 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 GAS2O43903 313 aaKnown RBP10.38□□□□□ -0.75
SSBP1-212ENST00000489378 PLEKHA8P1O95397 391 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 ADH1BP00325 375 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 ALDH2P05091 517 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 GLUD2P49448 558 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 PFKPQ01813 784 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 SIM2Q14190 667 aaPredicted RBP10.38□□□□□ -0.75
SSBP1-212ENST00000489378 GRASPQ7Z6J2 395 aaPredicted RBP10.38□□□□□ -0.75
SSBP1-212ENST00000489378 CATIPQ7Z7H3 387 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 CMTR1Q8N1G2 835 aaKnown RBP10.38□□□□□ -0.75
SSBP1-212ENST00000489378 HDAC7Q8WUI4 952 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 NLRP7Q8WX94 980 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 FGF13Q92913 245 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 B3GALT6Q96L58 329 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 NELL2Q99435 816 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 PLEKHA4Q9H4M7 779 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 CHST12Q9NRB3 414 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 FAM105AQ9NUU6 356 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 ZDHHC7Q9NXF8 308 aa10.38□□□□□ -0.75
SSBP1-212ENST00000489378 PRG3Q9Y2Y8 225 aaPredicted RBP10.38□□□□□ -0.75
SSBP1-212ENST00000489378 NBEAQ8NFP9 2946 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 AKAP13Q12802 2813 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 WDFY3Q8IZQ1 3526 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 WDR81Q562E7 1941 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 F8W810 466 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 NCAM2O15394 837 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 EFEMP2O95967 443 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 TMOD1P28289 359 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 NRLP54845 237 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 DRP2Q13474 957 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 LRSAM1Q6UWE0 723 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 AGMOQ6ZNB7 445 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 MTSS1LQ765P7 747 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 GLYCTKQ8IVS8 523 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 RNF168Q8IYW5 571 aaPredicted RBP10.37□□□□□ -0.75
SSBP1-212ENST00000489378 SRBD1Q8N5C6 995 aaKnown RBP10.37□□□□□ -0.75
SSBP1-212ENST00000489378 ITFG1Q8TB96 612 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 TMEM175Q9BSA9 504 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 LY9Q9HBG7 655 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 RXFP3Q9NSD7 469 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 CEP131Q9UPN4 1083 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 PIN4Q9Y237 131 aaKnown RBP10.37□□□□□ -0.75
SSBP1-212ENST00000489378 SSX2IPQ9Y2D8 614 aa10.37□□□□□ -0.75
SSBP1-212ENST00000489378 GREB1Q4ZG55 1949 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 ERICH2A1L162 156 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 ZNF623O75123 536 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 ZMYND10O75800 440 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 KCNK5O95279 499 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 POMCP01189 267 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 SMARCA1P28370 1054 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 LIMK1P53667 647 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 RING1Q06587 406 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 ADCY1Q08828 1119 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 SF3A2Q15428 464 aaKnown RBP10.36□□□□□ -0.75
SSBP1-212ENST00000489378 AASDHQ4L235 1098 aaPredicted RBP10.36□□□□□ -0.75
SSBP1-212ENST00000489378 LILRA6Q6PI73 481 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 ZNF852Q6ZMS4 543 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.36□□□□□ -0.75
SSBP1-212ENST00000489378 SCUBE3Q8IX30 993 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 URGCPQ8TCY9 931 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 FAM193BQ96PV7 902 aaPredicted RBP10.36□□□□□ -0.75
SSBP1-212ENST00000489378 PHF20Q9BVI0 1012 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 CHRDQ9H2X0 955 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 HEBP1Q9NRV9 189 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 GABBR1Q9UBS5 961 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 RCAN3Q9UKA8 241 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 NDRG2Q9UN36 371 aaKnown RBP10.36□□□□□ -0.75
SSBP1-212ENST00000489378 NOTCH4Q99466 2003 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 DMXL2Q8TDJ6 3036 aa10.36□□□□□ -0.75
SSBP1-212ENST00000489378 ASH1LQ9NR48 2969 aaKnown RBP10.35□□□□□ -0.75
SSBP1-212ENST00000489378 SRRM3A6NNA2 597 aaPredicted RBP10.35□□□□□ -0.75
SSBP1-212ENST00000489378 CHURC1-FNTBB4DL54 471 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 ZIC2O95409 532 aaPredicted RBP10.35□□□□□ -0.75
SSBP1-212ENST00000489378 SKIP12755 728 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 RPL17P18621 184 aaKnown RBP10.35□□□□□ -0.75
SSBP1-212ENST00000489378 SPINK2P20155 84 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 FNTBP49356 437 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 DSG1Q02413 1049 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 TRDNQ13061 729 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 CCDC6Q16204 474 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 PLA2G2CQ5R387 149 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 CTCFLQ8NI51 663 aaPredicted RBP10.35□□□□□ -0.75
SSBP1-212ENST00000489378 GCOM2Q9BZD3 368 aaPredicted RBP10.35□□□□□ -0.75
SSBP1-212ENST00000489378 PLA2G2FQ9BZM2 168 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 IL25Q9H293 177 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 DIAPH3Q9NSV4 1193 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 MRPS17Q9Y2R5 130 aaKnown RBP10.35□□□□□ -0.75
SSBP1-212ENST00000489378 PCDHB2Q9Y5E7 798 aa10.35□□□□□ -0.75
SSBP1-212ENST00000489378 TAF6LQ9Y6J9 622 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms