RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 GAB3Q8WWW8 586 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 GFM2Q969S9 779 aaKnown RBP5.5□□□□□ -1.53
XRN1-213ENST00000489241 DYDC2Q96IM9 177 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 PRDM12Q9H4Q4 367 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 POLR3BQ9NW08 1133 aaPredicted RBP5.5□□□□□ -1.53
XRN1-213ENST00000489241 PRSS50Q9UI38 385 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 MAGEL2Q9UJ55 1249 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 TUBD1Q9UJT1 453 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 TMPRSS11EQ9UL52 423 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 OAZ3Q9UMX2 235 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 VWA7Q9Y334 891 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 PCDHB6Q9Y5E3 794 aa5.5□□□□□ -1.53
XRN1-213ENST00000489241 APAF1O14727 1248 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 DAPK3O43293 454 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 NDUFS2O75306 463 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 OFD1O75665 1012 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 AMHP03971 560 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 RRADP55042 308 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 NRG3P56975 720 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 ANTXR2P58335 489 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 SPIDRQ14159 915 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 VPS72Q15906 364 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 ATAT1Q5SQI0 421 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 TRIM68Q6AZZ1 485 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 OR14C36Q8NHC7 312 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 LPPQ93052 612 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 ADOQ96SZ5 270 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 GTPBP4Q9BZE4 634 aaKnown RBP5.49□□□□□ -1.53
XRN1-213ENST00000489241 CSRNP2Q9H175 543 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 KCTD10Q9H3F6 313 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 DDX21Q9NR30 783 aaKnown RBP eCLIP5.49□□□□□ -1.53
XRN1-213ENST00000489241 C1orf112Q9NSG2 853 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 USP25Q9UHP3 1055 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 SERPINB13Q9UIV8 391 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 DNM3Q9UQ16 869 aa5.49□□□□□ -1.53
XRN1-213ENST00000489241 CTNND1O60716 968 aaKnown RBP5.48□□□□□ -1.53
XRN1-213ENST00000489241 RAD17O75943 681 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 FSBPO95073 299 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 SLPIP03973 132 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 POU2F2P09086 479 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 NBPF7P0C2Y1 421 aaPredicted RBP5.48□□□□□ -1.53
XRN1-213ENST00000489241 COMTP21964 271 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 STAT5BP51692 787 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 NEK3P51956 506 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 HMGA2P52926 109 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 USP14P54578 494 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 LGALS4P56470 323 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 PPARAQ07869 468 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 PCOLCEQ15113 449 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 RNF151Q2KHN1 245 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 COBLL1Q53SF7 1204 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 CHST15Q7LFX5 561 aaPredicted RBP5.48□□□□□ -1.53
XRN1-213ENST00000489241 CATIPQ7Z7H3 387 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 LYSMD2Q8IV50 215 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 FUKQ8N0W3 1084 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 MIER2Q8N344 545 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 AUTS2Q8WXX7 1259 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 EDAQ92838 391 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 HPS3Q969F9 1004 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 PAWRQ96IZ0 340 aaKnown RBP5.48□□□□□ -1.53
XRN1-213ENST00000489241 WDR92Q96MX6 357 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 OSBPL6Q9BZF3 934 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 HAPLN2Q9GZV7 340 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 MSL2Q9HCI7 577 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 MAN1C1Q9NR34 630 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 SLC30A1Q9Y6M5 507 aa5.48□□□□□ -1.53
XRN1-213ENST00000489241 ANO9A1A5B4 782 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 A6NNZ2 444 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 SUV39H1O43463 412 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 CR2P20023 1033 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 FXR1P51114 621 aaKnown RBP eCLIP5.47□□□□□ -1.53
XRN1-213ENST00000489241 SLC5A3P53794 718 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 KIF23Q02241 960 aaPredicted RBP5.47□□□□□ -1.53
XRN1-213ENST00000489241 NFYCQ13952 458 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 TRIM25Q14258 630 aaKnown RBP5.47□□□□□ -1.53
XRN1-213ENST00000489241 MUM1Q2TAK8 710 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 USP30Q70CQ3 517 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 ZFPM1Q8IX07 1006 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 BCL6BQ8N143 479 aaPredicted RBP5.47□□□□□ -1.53
XRN1-213ENST00000489241 PPM1NQ8N819 430 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 TSPEARQ8WU66 669 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 TTC17Q96AE7 1141 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 DPYSL5Q9BPU6 564 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 ARPC5LQ9BPX5 153 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 DNAI1Q9UI46 699 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 FAM184BQ9ULE4 1060 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 FAM50BQ9Y247 325 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 NR2E1Q9Y466 385 aa5.47□□□□□ -1.53
XRN1-213ENST00000489241 ARHGAP6O43182 974 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 CDC14BO60729 498 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 IFIT2P09913 472 aaKnown RBP5.46□□□□□ -1.54
XRN1-213ENST00000489241 MYBP10242 640 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 PHKG2P15735 406 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 MRE11P49959 708 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 CDK17Q00537 523 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 PICALMQ13492 652 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 SAFBQ15424 915 aaKnown RBP eCLIP5.46□□□□□ -1.54
XRN1-213ENST00000489241 MBNL2Q5VZF2 373 aaKnown RBP5.46□□□□□ -1.54
XRN1-213ENST00000489241 FAM180AQ6UWF9 173 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 LMBR1LQ6UX01 489 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms