RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 LDHAP00338 332 aaKnown RBP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 TFRCP02786 760 aaKnown RBP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 ADRB2P07550 413 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 ARF4P18085 180 aaPredicted RBP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 FGFR4P22455 802 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 MATR3P43243 847 aaKnown RBP eCLIP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 MCCD1P59942 119 aaPredicted RBP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 UBXN1Q04323 297 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 PPP2R3AQ06190 1150 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 HSP90AA2PQ14568 343 aaPredicted RBP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 PCBP1Q15365 356 aaKnown RBP eCLIP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 SNRNP35Q16560 246 aaKnown RBP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 TMEM132AQ24JP5 1023 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 EEF1DP3Q658K8 133 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 CBWD2Q8IUF1 395 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 VSTM4Q8IW00 320 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 RDH13Q8NBN7 331 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 FAM213AQ9BRX8 229 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 MSTO1Q9BUK6 570 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 SENP6Q9GZR1 1112 aaPredicted RBP12.54□□□□□ -0.4
CMSS1-205ENST00000489081 TRPV6Q9H1D0 765 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 CDT1Q9H211 546 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 PRDM10Q9NQV6 1147 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 NOD1Q9Y239 953 aa12.54□□□□□ -0.4
CMSS1-205ENST00000489081 CENPFP49454 3210 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 ZNF233A6NK53 670 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 OGTO15294 1046 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 FAM189A1O60320 539 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 CHRNA1P02708 482 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 KRT13P13646 458 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 SFPQP23246 707 aaKnown RBP eCLIP12.53□□□□□ -0.4
CMSS1-205ENST00000489081 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
CMSS1-205ENST00000489081 THPOP40225 353 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 GJA8P48165 433 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 VAMP7P51809 220 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 KCNH2Q12809 1159 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 BFSP1Q12934 665 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
CMSS1-205ENST00000489081 PTPN21Q16825 1174 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 ZNF568Q3ZCX4 644 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 FAM26DQ5JW98 314 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 CRELD2Q6UXH1 353 aaPredicted RBP12.53□□□□□ -0.4
CMSS1-205ENST00000489081 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 ZBTB33Q86T24 672 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 DRC7Q8IY82 874 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 SPC24Q8NBT2 197 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 PLEKHO2Q8TD55 490 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 SLC35C1Q96A29 364 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 CPB2Q96IY4 423 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 MFSD14AQ96MC6 490 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 TCHPQ9BT92 498 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 PDZD7Q9H5P4 517 aa12.53□□□□□ -0.4
CMSS1-205ENST00000489081 A0A1B0GUA9 196 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 A0A1W2PQC6 194 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 CAND2O75155 1236 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 AFPP02771 609 aaKnown RBP12.52□□□□□ -0.41
CMSS1-205ENST00000489081 CTSHP09668 335 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 MCF2P10911 925 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 HARSP12081 509 aaKnown RBP12.52□□□□□ -0.41
CMSS1-205ENST00000489081 AXLP30530 894 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 ACOT2P49753 483 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 ENPEPQ07075 957 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 CYP24A1Q07973 514 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 NCBP1Q09161 790 aaKnown RBP12.52□□□□□ -0.41
CMSS1-205ENST00000489081 DCAF17Q5H9S7 520 aaPredicted RBP12.52□□□□□ -0.41
CMSS1-205ENST00000489081 ZBTB41Q5SVQ8 909 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 FKBP15Q5T1M5 1219 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 TCERG1LQ5VWI1 586 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 TMC6Q7Z403 805 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 FAM228AQ86W67 206 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 CDR2LQ86X02 465 aaPredicted RBP12.52□□□□□ -0.41
CMSS1-205ENST00000489081 FAM126BQ8IXS8 530 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 TMC2Q8TDI7 906 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 ERGIC2Q96RQ1 377 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 AGPAT5Q9NUQ2 364 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 NOC2LQ9Y3T9 749 aaKnown RBP12.52□□□□□ -0.41
CMSS1-205ENST00000489081 ITIH6Q6UXX5 1313 aa12.52□□□□□ -0.41
CMSS1-205ENST00000489081 TRIP12Q14669 1992 aaPredicted RBP12.52□□□□□ -0.41
CMSS1-205ENST00000489081 C19orf67A6NJJ6 358 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 CD4P01730 458 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 TRIM49P0CI25 452 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 TRIM49CP0CI26 452 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 COL6A1P12109 1028 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 CKBP12277 381 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 DLG4P78352 724 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 RBL2Q08999 1139 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 PSMD6Q15008 389 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 SYCP1Q15431 976 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 SEZ6Q53EL9 994 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 C1orf220Q5T0J3 134 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 ZNF618Q5T7W0 954 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 SPECC1LQ69YQ0 1117 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 ANKLE1Q8NAG6 615 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 PARD3BQ8TEW8 1205 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 IMPACTQ9P2X3 320 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 CPSF3Q9UKF6 684 aaKnown RBP12.51□□□□□ -0.41
CMSS1-205ENST00000489081 SIK3Q9Y2K2 1263 aa12.51□□□□□ -0.41
CMSS1-205ENST00000489081 LRRIQ3A6PVS8 624 aaPredicted RBP12.5□□□□□ -0.41
CMSS1-205ENST00000489081 RPS6KA5O75582 802 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms