RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 ANK1P16157 1881 aa11.67□□□□□ -0.54
USP11-209ENST00000488848 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 INO80B-WBP1J3KQ70 363 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 N4BP3O15049 544 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 CLIC2O15247 247 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 CLDN3O15551 220 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 TPM2P07951 284 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 ARF4P18085 180 aaPredicted RBP11.66□□□□□ -0.54
USP11-209ENST00000488848 MTIF2P46199 727 aaKnown RBP11.66□□□□□ -0.54
USP11-209ENST00000488848 CYP24A1Q07973 514 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 TRIM14Q14142 442 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 PSMD6Q15008 389 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 PTGISQ16647 500 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 KIZQ2M2Z5 673 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 DCAF4L1Q3SXM0 396 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 CCDC40Q4G0X9 1142 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 C1orf220Q5T0J3 134 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 SPECC1LQ69YQ0 1117 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 C15orf39Q6ZRI6 1047 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 APBB1IPQ7Z5R6 666 aaPredicted RBP11.66□□□□□ -0.54
USP11-209ENST00000488848 PARD3BQ8TEW8 1205 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 POMGNT1Q8WZA1 660 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 WNT8BQ93098 351 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 TSPAN18Q96SJ8 248 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 NOC4LQ9BVI4 516 aaKnown RBP11.66□□□□□ -0.54
USP11-209ENST00000488848 EDEM3Q9BZQ6 932 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 TTYH3Q9C0H2 523 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 FAM49AQ9H0Q0 323 aaPredicted RBP11.66□□□□□ -0.54
USP11-209ENST00000488848 PDZD7Q9H5P4 517 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 PLCB1Q9NQ66 1216 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 CHST12Q9NRB3 414 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 CPSF3Q9UKF6 684 aaKnown RBP11.66□□□□□ -0.54
USP11-209ENST00000488848 AGO2Q9UKV8 859 aaKnown RBP11.66□□□□□ -0.54
USP11-209ENST00000488848 SIK3Q9Y2K2 1263 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 COQ4Q9Y3A0 265 aa11.66□□□□□ -0.54
USP11-209ENST00000488848 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.66□□□□□ -0.54
USP11-209ENST00000488848 A0A1W2PQJ5 194 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 ZNF233A6NK53 670 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 STX10O60499 249 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 N4BP1O75113 896 aaKnown RBP11.65□□□□□ -0.54
USP11-209ENST00000488848 AFPP02771 609 aaKnown RBP11.65□□□□□ -0.54
USP11-209ENST00000488848 CYP2J2P51589 502 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 AP3M2P53677 418 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 SURF1Q15526 300 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 DPY19L2P1Q6NXN4 242 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 NOTUMQ6P988 496 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 UBE2Q1Q7Z7E8 422 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 CBWD2Q8IUF1 395 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 TMEM40Q8WWA1 233 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 BICD1Q96G01 975 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 OSMRQ99650 979 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 CDT1Q9H211 546 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 TAB2Q9NYJ8 693 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 PDCD11Q14690 1871 aaKnown RBP11.65□□□□□ -0.54
USP11-209ENST00000488848 CITO14578 2027 aa11.65□□□□□ -0.54
USP11-209ENST00000488848 M0QZ92 97 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 TEX33O43247 280 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 B4GALT5O43286 388 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 B4GALT4O60513 344 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 ERLIN2O94905 339 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 PARNO95453 639 aaKnown RBP11.64□□□□□ -0.55
USP11-209ENST00000488848 CHRNA1P02708 482 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 KRT13P13646 458 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 RFX1P22670 979 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 FECHP22830 423 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 GRM5P41594 1212 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 GSDMDP57764 484 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 KCNH2Q12809 1159 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 FBXO47Q5MNV8 452 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 FKBP15Q5T1M5 1219 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 CEP135Q66GS9 1140 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 SLC27A1Q6PCB7 646 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 FAM228AQ86W67 206 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 NT5DC4Q86YG4 428 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 CD302Q8IX05 232 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 CCDC155Q8N6L0 562 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 PLEKHO2Q8TD55 490 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 EEF2KMTQ96G04 330 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 CDHR5Q9HBB8 845 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 TRMT13Q9NUP7 481 aaKnown RBP11.64□□□□□ -0.55
USP11-209ENST00000488848 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.64□□□□□ -0.55
USP11-209ENST00000488848 CDY2AQ9Y6F7 541 aa11.64□□□□□ -0.55
USP11-209ENST00000488848 IL18RAPO95256 599 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 CLTAP09496 248 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 FMO5P49326 533 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 VAMP7P51809 220 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 NCBP1Q09161 790 aaKnown RBP11.63□□□□□ -0.55
USP11-209ENST00000488848 DSC3Q14574 896 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 ZNF568Q3ZCX4 644 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 HSP90AA4PQ58FG1 418 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 XKR4Q5GH76 650 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 FAM47CQ5HY64 1035 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 EEF1DP3Q658K8 133 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 CATSPER4Q7RTX7 472 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 FAXDC2Q96IV6 333 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 ZBTB45Q96K62 511 aaPredicted RBP11.63□□□□□ -0.55
USP11-209ENST00000488848 NUP58Q9BVL2 599 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 VPS16Q9H269 839 aa11.63□□□□□ -0.55
USP11-209ENST00000488848 ASB7Q9H672 318 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms