RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 RGL1Q9NZL6 768 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 DDX25Q9UHL0 483 aaKnown RBP14.03□□□□□ -0.16
ABCA2-219ENST00000488535 PCDHAC2Q9Y5I4 1007 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 GOLGA8RI6L899 631 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 CLDN3O15551 220 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 PEX11AO75192 247 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 AKAP3O75969 853 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 TPBGLP0DKB5 382 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 CACNA2D1P54289 1103 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 SFR1Q86XK3 245 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 UBL4BQ8N7F7 174 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 DENND2DQ9H6A0 471 aaPredicted RBP14.03□□□□□ -0.16
ABCA2-219ENST00000488535 NMRK1Q9NWW6 199 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 A6NHS1 94 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 RSPH10B2B2RC85 870 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 RSPH10BP0C881 870 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 RASSF2P50749 326 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 KHDC1Q4VXA5 237 aaKnown RBP14.03□□□□□ -0.16
ABCA2-219ENST00000488535 SNX30Q5VWJ9 437 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 GSTA5Q7RTV2 222 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 SCG3Q8WXD2 468 aaKnown RBP14.03□□□□□ -0.16
ABCA2-219ENST00000488535 KLF6Q99612 283 aaPredicted RBP14.03□□□□□ -0.16
ABCA2-219ENST00000488535 C12orf65Q9H3J6 166 aaKnown RBP14.03□□□□□ -0.16
ABCA2-219ENST00000488535 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 DNAJC12Q9UKB3 198 aa14.03□□□□□ -0.16
ABCA2-219ENST00000488535 OPHN1O60890 802 aa14.02□□□□□ -0.16
ABCA2-219ENST00000488535 CDK8P49336 464 aa14.02□□□□□ -0.16
ABCA2-219ENST00000488535 PDCD2Q16342 344 aaPredicted RBP14.02□□□□□ -0.16
ABCA2-219ENST00000488535 MFN1Q8IWA4 741 aa14.02□□□□□ -0.16
ABCA2-219ENST00000488535 PRELID2Q8N945 189 aa14.02□□□□□ -0.16
ABCA2-219ENST00000488535 PPFIBP2Q8ND30 876 aa14.02□□□□□ -0.16
ABCA2-219ENST00000488535 LNX1Q8TBB1 728 aaPredicted RBP14.02□□□□□ -0.16
ABCA2-219ENST00000488535 ABTB1Q969K4 478 aaPredicted RBP14.02□□□□□ -0.16
ABCA2-219ENST00000488535 TTC1Q99614 292 aa14.02□□□□□ -0.16
ABCA2-219ENST00000488535 RTFDC1Q9BY42 306 aaPredicted RBP14.02□□□□□ -0.16
ABCA2-219ENST00000488535 STK17AQ9UEE5 414 aa14.02□□□□□ -0.16
ABCA2-219ENST00000488535 TTC7AQ9ULT0 858 aaPredicted RBP14.02□□□□□ -0.16
ABCA2-219ENST00000488535 USP17L5A8MUK1 530 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 H0YIN7 160 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 RNF8O76064 485 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 NUDT17P0C025 328 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 PYGBP11216 843 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 ATP6V1C1P21283 382 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 C2CD6Q53TS8 623 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 DAB2IPQ5VWQ8 1189 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 ARHGEF18Q6ZSZ5 1173 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 SLC20A1Q8WUM9 679 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 GORASP1Q9BQQ3 440 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 MKNK1Q9BUB5 465 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 EDEM3Q9BZQ6 932 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 KCNMB3Q9NPA1 279 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 GRHL1Q9NZI5 618 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 MTUS1Q9ULD2 1270 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 NID2Q14112 1375 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.02□□□□□ -0.17
ABCA2-219ENST00000488535 TXNDC9O14530 226 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 CA4P22748 312 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 FOXN2P32314 431 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 IL9RQ01113 521 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 CDR2Q01850 454 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 KRT17Q04695 432 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 VSTM1Q6UX27 236 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 HS2ST1Q7LGA3 356 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 MTDHQ86UE4 582 aaKnown RBP14.02□□□□□ -0.17
ABCA2-219ENST00000488535 TEX9Q8N6V9 391 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 RFFLQ8WZ73 363 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 SYN2Q92777 582 aaPredicted RBP14.02□□□□□ -0.17
ABCA2-219ENST00000488535 KIFAP3Q92845 792 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 HES6Q96HZ4 224 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 UBE2OQ9C0C9 1292 aaKnown RBP14.02□□□□□ -0.17
ABCA2-219ENST00000488535 ZFP69BQ9UJL9 534 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 PHTF1Q9UMS5 762 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 DAGLAQ9Y4D2 1042 aa14.02□□□□□ -0.17
ABCA2-219ENST00000488535 PASKQ96RG2 1323 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 CHMP2AO43633 222 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 ECEL1O95672 775 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 PYGMP11217 842 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 SGO2Q562F6 1265 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
ABCA2-219ENST00000488535 TRIM74Q86UV6 250 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 TRIM73Q86UV7 250 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 PDCD7Q8N8D1 485 aaKnown RBP14.01□□□□□ -0.17
ABCA2-219ENST00000488535 MTA3Q9BTC8 594 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 OCEL1Q9H607 264 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 PCMTD2Q9NV79 361 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
ABCA2-219ENST00000488535 C2orf71A6NGG8 1288 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 PFDN1O60925 122 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 FTLP02792 175 aaPredicted RBP14.01□□□□□ -0.17
ABCA2-219ENST00000488535 SKIP12755 728 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 COMTP21964 271 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 ADCY7P51828 1080 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 KPNB1Q14974 876 aaKnown RBP14.01□□□□□ -0.17
ABCA2-219ENST00000488535 CERKLQ49MI3 558 aaPredicted RBP14.01□□□□□ -0.17
ABCA2-219ENST00000488535 HHATQ5VTY9 493 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 DSTYKQ6XUX3 929 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 DEFB132Q7Z7B7 95 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 HIPK4Q8NE63 616 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 COG5Q9UP83 839 aa14.01□□□□□ -0.17
ABCA2-219ENST00000488535 BZW2Q9Y6E2 419 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms