RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 MRVI1Q9Y6F6 885 aa6.81□□□□□ -1.32
CDHR3-213ENST00000488386 LAMA2P24043 3122 aaKnown RBP6.81□□□□□ -1.32
CDHR3-213ENST00000488386 TRIP12Q14669 1992 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-213ENST00000488386 CDH23Q9H251 3354 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 MROH7Q68CQ1 1323 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 PRAMEF27A3QJZ7 478 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 FAM221AA4D161 298 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 GCOM1H8Y6P7 765 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-213ENST00000488386 CDC45O75419 566 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 CABYRO75952 493 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 GH1P01241 217 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 IGLV1-40P01703 118 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 POLR2MP0CAP2 368 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 MCM5P33992 734 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 ZNF76P36508 570 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 NT5C2P49902 561 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 CPT1AP50416 773 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 ZNF200P98182 395 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-213ENST00000488386 SP4Q02446 784 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 STXBP2Q15833 593 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 UBE2SQ16763 222 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 ZBTB37Q5TC79 503 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 RNF43Q68DV7 783 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 CYFIP1Q7L576 1253 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 HS2ST1Q7LGA3 356 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 OTOP2Q7RTS6 562 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 RELL1Q8IUW5 271 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 SMYD4Q8IYR2 804 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-213ENST00000488386 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 FBXO27Q8NI29 283 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 MYLIPQ8WY64 445 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 KAT2BQ92831 832 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 ELMO3Q96BJ8 720 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 VWCEQ96DN2 955 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 MPHOSPH6Q99547 160 aaKnown RBP6.8□□□□□ -1.32
CDHR3-213ENST00000488386 MTG1Q9BT17 334 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-213ENST00000488386 C1GALT1Q9NS00 363 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 DDX41Q9UJV9 622 aaKnown RBP6.8□□□□□ -1.32
CDHR3-213ENST00000488386 PNMA2Q9UL42 364 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 NAP1L2Q9ULW6 460 aaPredicted RBP6.8□□□□□ -1.32
CDHR3-213ENST00000488386 PCDHGB7Q9Y5F8 929 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 COL6A3P12111 3177 aa6.8□□□□□ -1.32
CDHR3-213ENST00000488386 TANC1Q9C0D5 1861 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 GFRA2O00451 464 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 ADAMTS3O15072 1205 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 NKRFO15226 690 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 DTNBO60941 627 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 RNGTTO60942 597 aaKnown RBP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 EIF3JO75822 258 aaKnown RBP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 DDAH1O94760 285 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 GGPS1O95749 300 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 MYOGP15173 224 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 UBA1P22314 1058 aaKnown RBP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 RABGGTBP53611 331 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 MRPS9P82933 396 aaKnown RBP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 CDK5R2Q13319 367 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 PPIGQ13427 754 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 HSDL1Q3SXM5 330 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 ZNF394Q53GI3 561 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 FBXL19Q6PCT2 694 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 PAOXQ6QHF9 649 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 TMCO2Q7Z6W1 182 aaPredicted RBP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 ZDHHC13Q8IUH4 622 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 DHX37Q8IY37 1157 aaKnown RBP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 TMEM199Q8N511 208 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 FBXL6Q8N531 539 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 SMARCC2Q8TAQ2 1214 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 RRP36Q96EU6 259 aaKnown RBP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 TMEM87BQ96K49 555 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 NEK1Q96PY6 1258 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 UIMC1Q96RL1 719 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 CTAGE1Q96RT6 745 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 IWS1Q96ST2 819 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 CDX2Q99626 313 aaPredicted RBP6.79□□□□□ -1.32
CDHR3-213ENST00000488386 YIPF2Q9BWQ6 316 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 FBRSQ9HAH7 460 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 IL23AQ9NPF7 189 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 ADAMTS1Q9UHI8 967 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 SLC12A7Q9Y666 1083 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 TET1Q8NFU7 2136 aa6.79□□□□□ -1.32
CDHR3-213ENST00000488386 EYSQ5T1H1 3165 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 PTPRSQ13332 1948 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 LOC102724159A0A0B4J2E5 919 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 KLF18A0A0U1RQI7 1052 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 B4DLN1 442 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 MEIS2O14770 477 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 CILPO75339 1184 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 F13BP05160 661 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 CCND2P30279 289 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 LIFRP42702 1097 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 RBM25P49756 843 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 MRPL12P52815 198 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 EXOSC10Q01780 885 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 GHRHRQ02643 423 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 APOBRQ0VD83 1088 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 PWP1Q13610 501 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 MAP7Q14244 749 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 PWP2Q15269 919 aaKnown RBP6.78□□□□□ -1.32
CDHR3-213ENST00000488386 PTGISQ16647 500 aa6.78□□□□□ -1.32
CDHR3-213ENST00000488386 TCTN1Q2MV58 587 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms