RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ANGPTL6Q8NI99 470 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 ANKRD49Q8WVL7 239 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 ATL1Q8WXF7 558 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 MAP3K14Q99558 947 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 CIB1Q99828 191 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 FANCEQ9HB96 536 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 DDX56Q9NY93 547 aaKnown RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 ADAMTSL3P82987 1691 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 UBR1Q8IWV7 1749 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 MYCP01106 439 aaPredicted RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 SNRPA1P09661 255 aaKnown RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 M6PRP20645 277 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 RCVRNP35243 200 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 IL15P40933 162 aaPredicted RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 IFITM2Q01629 132 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 USP41Q3LFD5 358 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 NXNQ6DKJ4 435 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 DCDC5Q6ZRR9 648 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 ACAD11Q709F0 780 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 ANO5Q75V66 913 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 ZC3H18Q86VM9 953 aaKnown RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 STK11IPQ8N1F8 1099 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 NPLOC4Q8TAT6 608 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 SPATA20Q8TB22 786 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 MDM1Q8TC05 714 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 USP6NLQ92738 828 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 SGF29Q96ES7 293 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 UROC1Q96N76 676 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 UQCC2Q9BRT2 126 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 PPP1R12CQ9BZL4 782 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 SENP6Q9GZR1 1112 aaPredicted RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 STX18Q9P2W9 335 aaKnown RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 PCDHB4Q9Y5E5 795 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 C4AP0C0L4 1744 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 C4BP0C0L5 1744 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 CTNND1O60716 968 aaKnown RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 ENTPD5O75356 428 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 GCP02774 474 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 UBTFL6P0CB48 400 aaPredicted RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 BAG6P46379 1132 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 MAGOHP61326 146 aaKnown RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 PPARAQ07869 468 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 TUBA3CQ13748 450 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 SEPT6Q14141 434 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 LPIN1Q14693 890 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 C15orf59Q2T9L4 293 aaPredicted RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 C4orf46Q504U0 113 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 HERC4Q5GLZ8 1057 aaPredicted RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 FYB2Q5VWT5 728 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 PHLDB2Q86SQ0 1253 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 MICU3Q86XE3 530 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 SIX5Q8N196 739 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 TOR1AIP2Q8NFQ8 470 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 MAGOHBQ96A72 148 aaKnown RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 EME1Q96AY2 570 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 NMD3Q96D46 503 aaKnown RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 SPATA17Q96L03 361 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 BIRC8Q96P09 236 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 DNAJC7Q99615 494 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 ELAC2Q9BQ52 826 aaKnown RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 DDX23Q9BUQ8 820 aaKnown RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 CCDC177Q9NQR7 707 aaPredicted RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 IGSF5Q9NSI5 407 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 RBM12Q9NTZ6 932 aaKnown RBP6.77□□□□□ -1.32
SIK3-212ENST00000488337 SLC38A7Q9NVC3 462 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 COQ6Q9Y2Z9 468 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 PCDHB6Q9Y5E3 794 aa6.77□□□□□ -1.32
SIK3-212ENST00000488337 ZSCAN5CA6NGD5 496 aaPredicted RBP6.77□□□□□ -1.33
SIK3-212ENST00000488337 TMCC2O75069 709 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 METAP2P50579 478 aaKnown RBP eCLIP6.77□□□□□ -1.33
SIK3-212ENST00000488337 SLC34A1Q06495 639 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 GALNT1Q10472 559 aaPredicted RBP6.77□□□□□ -1.33
SIK3-212ENST00000488337 WDR59Q6PJI9 974 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 C4orf50Q6ZRC1 276 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 KRT77Q7Z794 578 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 GLRX5Q86SX6 157 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 NATD1Q8N6N6 113 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 METTL25Q8N6Q8 603 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 CABLES1Q8TDN4 633 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 CPLX3Q8WVH0 158 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 LPIN2Q92539 896 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 PTPRUQ92729 1446 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 CLIC5Q9NZA1 410 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 SEPT10Q9P0V9 454 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 UVRAGQ9P2Y5 699 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 TMEM59LQ9UK28 342 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 ASAP1Q9ULH1 1129 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 CFL2Q9Y281 166 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 ZNF652Q9Y2D9 606 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 EPN1Q9Y6I3 576 aaPredicted RBP6.77□□□□□ -1.33
SIK3-212ENST00000488337 PIK3C2AO00443 1686 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 TRIM77I1YAP6 450 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 SEMA3EO15041 775 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 SNX2O60749 519 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 TBX10O75333 385 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 TFAP2AP05549 437 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 ZCCHC18P0CG32 403 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 CHN1P15882 459 aa6.77□□□□□ -1.33
SIK3-212ENST00000488337 IARSP41252 1262 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms