RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 THNSL1Q8IYQ7 743 aa18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 ARNTL2Q8WYA1 636 aa18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 BICD1Q96G01 975 aa18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 GAD1Q99259 594 aa18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 SLC28A3Q9HAS3 691 aa18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 TYW1Q9NV66 732 aaKnown RBP18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 PARP2Q9UGN5 583 aa18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 USP25Q9UHP3 1055 aa18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 PLAGL2Q9UPG8 496 aa18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 SZT2Q5T011 3432 aa18.81■□□□□ 0.6
SHROOM1-205ENST00000488072 POMCP01189 267 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 RPN1P04843 607 aaKnown RBP18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 MLH1P40692 756 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 TNFSF9P41273 254 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 PCBP1Q15365 356 aaKnown RBP eCLIP18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 FAM26FQ5R3K3 315 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 ZNF280BQ86YH2 543 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 MAP4K3Q8IVH8 894 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 NELFCDQ8IXH7 590 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 FIBCD1Q8N539 461 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 KIAA0895Q8NCT3 520 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 RABGGTAQ92696 567 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 CCDC51Q96ER9 411 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 PYM1Q9BRP8 204 aaKnown RBP18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 TCHPQ9BT92 498 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 TRIM6Q9C030 488 aaPredicted RBP18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 LRRC27Q9C0I9 530 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 ST6GALNAC4Q9H4F1 302 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 PRDM12Q9H4Q4 367 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 CWH43Q9H720 699 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 RSAD1Q9HA92 442 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 OLFML3Q9NRN5 406 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 MYH11P35749 1972 aa18.8■□□□□ 0.6
SHROOM1-205ENST00000488072 RECQL4O94761 1208 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 DDHD2O94830 711 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 CSPG5O95196 566 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 EOMESO95936 686 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 ADSSP30520 456 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 RAB27AP51159 221 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 SCNN1GP51170 649 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 UBE2HP62256 183 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 POSTNQ15063 836 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 CSPP1Q1MSJ5 1256 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 L1TD1Q5T7N2 865 aaKnown RBP18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 ISM2Q6H9L7 571 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 MPZL3Q6UWV2 235 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 EPM2AIP1Q7L775 607 aaPredicted RBP18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 CMTR2Q8IYT2 770 aaKnown RBP18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 GSTCDQ8NEC7 633 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 SCFD1Q8WVM8 642 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 GUCD1Q96NT3 240 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 TMEM117Q9H0C3 514 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 GBP3Q9H0R5 595 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 SEL1LQ9UBV2 794 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 ZMYM2Q9UBW7 1377 aa18.79■□□□□ 0.6
SHROOM1-205ENST00000488072 NT5C1B-RDH14C9J2C7 533 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 HNRNPDLO14979 420 aaKnown RBP18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 IGFBP6P24592 240 aaPredicted RBP18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 MATR3P43243 847 aaKnown RBP eCLIP18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 LIG4P49917 911 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 ZNF697Q5TEC3 545 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 SMYD4Q8IYR2 804 aaPredicted RBP18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 DEFB123Q8N688 67 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 GDPD5Q8WTR4 605 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 KCNN1Q92952 543 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 FAM84AQ96KN4 292 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 TBC1D13Q9NVG8 400 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 DNAJB4Q9UDY4 337 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 MAPK8IP1Q9UQF2 711 aa18.78■□□□□ 0.6
SHROOM1-205ENST00000488072 CHD9Q3L8U1 2897 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 PVALEFA0A1B0GWK0 134 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 ARL5CA6NH57 179 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 F8W810 466 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 TOM1L1O75674 476 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 PIGRP01833 764 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 ERVK-21P61565 698 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 SPAG1Q07617 926 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 ADGRE1Q14246 886 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 CAMK4Q16566 473 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 EPC2Q52LR7 807 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 NOMO2Q5JPE7 1267 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 GLRA4Q5JXX5 417 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 ZPBP2Q6X784 338 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 PGBD4Q96DM1 585 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 ACCSQ96QU6 501 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 CBWD1Q9BRT8 395 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 PCIF1Q9H4Z3 704 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 NRDE2Q9H7Z3 1164 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 EXOC1Q9NV70 894 aa18.77■□□□□ 0.6
SHROOM1-205ENST00000488072 GOLGA8IPA6NC78 632 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 GOLGA8JA6NMD2 632 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 H0YCG3 227 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 PTGESO14684 152 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 FAM189A1O60320 539 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 MCF2P10911 925 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 CTNNB1P35222 781 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 MCL1Q07820 350 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 SPOUT1Q5T280 376 aaKnown RBP18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 GLB1LQ6UWU2 654 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 TMEM173Q86WV6 379 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms