RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 FBXL18Q96ME1 805 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 TSPAN18Q96SJ8 248 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 PPP1R16BQ96T49 567 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 DUSP9Q99956 384 aaKnown RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 NOC4LQ9BVI4 516 aaKnown RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 TRAIPQ9BWF2 469 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 TRIM6Q9C030 488 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 MINDY3Q9H8M7 445 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 PTPRHQ9HD43 1115 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 FANCLQ9NW38 375 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 HSPBP1Q9NZL4 362 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 ARMCX3Q9UH62 379 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 AGO2Q9UKV8 859 aaKnown RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 ST3GAL5Q9UNP4 418 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 MYH9P35579 1960 aaKnown RBP12.05□□□□□ -0.48
HDLBP-242ENST00000488013 ZMYM2Q9UBW7 1377 aa12.05□□□□□ -0.48
HDLBP-242ENST00000488013 TRIM49BA6NDI0 452 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 LRRC10BA6NIK2 292 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 OGTO15294 1046 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 PFKMP08237 780 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 CLTAP09496 248 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 IQCF3P0C7M6 154 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 ZNF18P17022 549 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 ADSSP30520 456 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 HOXA11P31270 313 aaPredicted RBP12.04□□□□□ -0.48
HDLBP-242ENST00000488013 NFX1Q12986 1120 aaKnown RBP12.04□□□□□ -0.48
HDLBP-242ENST00000488013 LPIN1Q14693 890 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 LRRC26Q2I0M4 334 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 CCDC40Q4G0X9 1142 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 FILIP1LQ4L180 1135 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 CDKAL1Q5VV42 579 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 CEP135Q66GS9 1140 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 FAM228AQ86W67 206 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 GAS2L3Q86XJ1 694 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 CD302Q8IX05 232 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 TNS4Q8IZW8 715 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 SEPT8Q92599 483 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 WNT8BQ93098 351 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 ZNF668Q96K58 619 aaPredicted RBP12.04□□□□□ -0.48
HDLBP-242ENST00000488013 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 ANKFY1Q9P2R3 1169 aa12.04□□□□□ -0.48
HDLBP-242ENST00000488013 PIN4Q9Y237 131 aaKnown RBP12.04□□□□□ -0.48
HDLBP-242ENST00000488013 NOC2LQ9Y3T9 749 aaKnown RBP12.04□□□□□ -0.48
HDLBP-242ENST00000488013 CENPFP49454 3210 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 FSD2A1L4K1 749 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 CLIC2O15247 247 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 CBFA2T2O43439 604 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 EFCAB14O75071 495 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 TIMP1P01033 207 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 GHRP10912 638 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-242ENST00000488013 CYP2J2P51589 502 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 AP3M2P53677 418 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 YARSP54577 528 aaKnown RBP12.03□□□□□ -0.48
HDLBP-242ENST00000488013 CETN1Q12798 172 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 SNRNP35Q16560 246 aaKnown RBP12.03□□□□□ -0.48
HDLBP-242ENST00000488013 TCP11X2Q5H9J9 407 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 TRAF7Q6Q0C0 670 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 FAM186BQ8IYM0 893 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 RPUSD2Q8IZ73 545 aaKnown RBP12.03□□□□□ -0.48
HDLBP-242ENST00000488013 TMEM199Q8N511 208 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 TMEM40Q8WWA1 233 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 MED15Q96RN5 788 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 CBWD1Q9BRT8 395 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 CCDC94Q9BW85 323 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-242ENST00000488013 IFIH1Q9BYX4 1025 aaKnown RBP12.03□□□□□ -0.48
HDLBP-242ENST00000488013 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 PLEKHA5Q9HAU0 1116 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 CDHR5Q9HBB8 845 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 ERVK-5Q9HDB9 667 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 UBN1Q9NPG3 1134 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 TOPORSQ9NS56 1045 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-242ENST00000488013 C1orf112Q9NSG2 853 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 PADI3Q9ULW8 664 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 DOCK5Q9H7D0 1870 aa12.03□□□□□ -0.48
HDLBP-242ENST00000488013 KCNJ18B7U540 433 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 ANKRD63C9JTQ0 380 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 B4GALT5O43286 388 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 ZNF623O75123 536 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 AKAP3O75969 853 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 IL18RAPO95256 599 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 SERPINC1P01008 464 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 CXCL10P02778 98 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 RAG1P15918 1043 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 GTF2H1P32780 548 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 GRM5P41594 1212 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 MTIF2P46199 727 aaKnown RBP12.02□□□□□ -0.49
HDLBP-242ENST00000488013 MCCD1P59942 119 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-242ENST00000488013 KCNJ12Q14500 433 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 TWF2Q6IBS0 349 aaKnown RBP12.02□□□□□ -0.49
HDLBP-242ENST00000488013 SLC39A4Q6P5W5 647 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 SARM1Q6SZW1 724 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 NT5DC4Q86YG4 428 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 PGBD4Q96DM1 585 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 CNOT6LQ96LI5 555 aaKnown RBP12.02□□□□□ -0.49
HDLBP-242ENST00000488013 ACAP3Q96P50 834 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 CDT1Q9H211 546 aa12.02□□□□□ -0.49
HDLBP-242ENST00000488013 ASB7Q9H672 318 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms