RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 TSPAN6O43657 245 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 IL33O95760 270 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 AKAP5P24588 427 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 GUCY1A2P33402 732 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 MRPL49Q13405 166 aaKnown RBP7.02□□□□□ -1.29
USP48-209ENST00000487880 PPP2R5AQ15172 486 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 UAP1L1Q3KQV9 507 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 C3orf36Q3SXR2 165 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 FAM111BQ6SJ93 734 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 IL17RAQ96F46 866 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 OR14A2Q96R54 314 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 PDCD2LQ9BRP1 358 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 NCDNQ9UBB6 729 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 TCEAL9Q9UHQ7 104 aa7.02□□□□□ -1.29
USP48-209ENST00000487880 CNOT11Q9UKZ1 510 aaKnown RBP7.02□□□□□ -1.29
USP48-209ENST00000487880 WNT10BO00744 389 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 GZMKP49863 264 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 FOXL1Q12952 345 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 GRM7Q14831 915 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 PRAMEF14Q5SWL7 426 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 NXNQ6DKJ4 435 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 MIGA2Q7L4E1 593 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 PRR18Q8N4B5 295 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 OR5M3Q8NGP4 307 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 HDAC10Q969S8 669 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 AIFM3Q96NN9 605 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 C7orf25Q9BPX7 421 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 BDH2Q9BUT1 245 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 CD248Q9HCU0 757 aa7.01□□□□□ -1.29
USP48-209ENST00000487880 ATRNL1Q5VV63 1379 aa7□□□□□ -1.29
USP48-209ENST00000487880 HOXA3O43365 443 aaPredicted RBP7□□□□□ -1.29
USP48-209ENST00000487880 STC2O76061 302 aa7□□□□□ -1.29
USP48-209ENST00000487880 PARNO95453 639 aaKnown RBP7□□□□□ -1.29
USP48-209ENST00000487880 POU2F2P09086 479 aa7□□□□□ -1.29
USP48-209ENST00000487880 HMGB1P09429 215 aaKnown RBP7□□□□□ -1.29
USP48-209ENST00000487880 CTSWP56202 376 aa7□□□□□ -1.29
USP48-209ENST00000487880 FAM102BQ5T8I3 360 aa7□□□□□ -1.29
USP48-209ENST00000487880 ZNF572Q7Z3I7 529 aaPredicted RBP7□□□□□ -1.29
USP48-209ENST00000487880 POLNQ7Z5Q5 900 aa7□□□□□ -1.29
USP48-209ENST00000487880 CHPFQ8IZ52 775 aa7□□□□□ -1.29
USP48-209ENST00000487880 PQLC1Q8N2U9 271 aa7□□□□□ -1.29
USP48-209ENST00000487880 REPS2Q8NFH8 660 aa7□□□□□ -1.29
USP48-209ENST00000487880 CYFIP2Q96F07 1278 aa7□□□□□ -1.29
USP48-209ENST00000487880 TMEM176AQ96HP8 235 aa7□□□□□ -1.29
USP48-209ENST00000487880 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
USP48-209ENST00000487880 CDC5LQ99459 802 aaKnown RBP7□□□□□ -1.29
USP48-209ENST00000487880 MPHOSPH9Q99550 1183 aa7□□□□□ -1.29
USP48-209ENST00000487880 SLC12A5Q9H2X9 1139 aa7□□□□□ -1.29
USP48-209ENST00000487880 ZMYM3Q14202 1370 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 CT47B1P0C2W7 299 aaPredicted RBP6.99□□□□□ -1.29
USP48-209ENST00000487880 ALOX15P16050 662 aaPredicted RBP6.99□□□□□ -1.29
USP48-209ENST00000487880 PDCP20941 246 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 CYP2C19P33261 490 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 MSX2P35548 267 aaPredicted RBP6.99□□□□□ -1.29
USP48-209ENST00000487880 IL10RAQ13651 578 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 ICAM4Q14773 271 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 CXorf57Q6NSI4 855 aaKnown RBP6.99□□□□□ -1.29
USP48-209ENST00000487880 USP45Q70EL2 814 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 PDZD4Q76G19 769 aaPredicted RBP6.99□□□□□ -1.29
USP48-209ENST00000487880 TPH2Q8IWU9 490 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 TCEAL8Q8IYN2 117 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 MDM1Q8TC05 714 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 Q8TCH9 128 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 CEP95Q96GE4 821 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 ZNF512Q96ME7 567 aaPredicted RBP6.99□□□□□ -1.29
USP48-209ENST00000487880 SAMD11Q96NU1 681 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 GTPBP4Q9BZE4 634 aaKnown RBP6.99□□□□□ -1.29
USP48-209ENST00000487880 MANSC1Q9H8J5 431 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 LANCL2Q9NS86 450 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.99□□□□□ -1.29
USP48-209ENST00000487880 JAG2Q9Y219 1238 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 SH3BP1Q9Y3L3 701 aa6.99□□□□□ -1.29
USP48-209ENST00000487880 CFAP20Q9Y6A4 193 aaKnown RBP6.99□□□□□ -1.29
USP48-209ENST00000487880 SGTAO43765 313 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 AMY1AP04745 511 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 LPOP22079 712 aaPredicted RBP6.98□□□□□ -1.29
USP48-209ENST00000487880 FLT3LGP49771 235 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 ATP8B2P98198 1209 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 CDC42EP1Q00587 391 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 APBA1Q02410 837 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 SP140Q13342 867 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 GTF2H3Q13889 308 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 FAM214AQ32MH5 1076 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 MFSD14BQ5SR56 506 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 FKBP15Q5T1M5 1219 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 MFSD5Q6N075 450 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 LILRA6Q6PI73 481 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 Q6ZSN1 163 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 EPM2AIP1Q7L775 607 aaPredicted RBP6.98□□□□□ -1.29
USP48-209ENST00000487880 CATIPQ7Z7H3 387 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 TTC9BQ8N6N2 239 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 CASKIN2Q8WXE0 1202 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 ARL8AQ96BM9 186 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 UHRF1Q96T88 793 aaPredicted RBP6.98□□□□□ -1.29
USP48-209ENST00000487880 KCNH6Q9H252 994 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 PCDHB1Q9Y5F3 818 aa6.98□□□□□ -1.29
USP48-209ENST00000487880 PRPF3O43395 683 aaKnown RBP6.97□□□□□ -1.29
USP48-209ENST00000487880 ZNF623O75123 536 aa6.97□□□□□ -1.29
USP48-209ENST00000487880 COMTP21964 271 aa6.97□□□□□ -1.29
USP48-209ENST00000487880 PCSK1P29120 753 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms