RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 DDR1Q08345 913 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 SQSTM1Q13501 440 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 STILQ15468 1287 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 CDSNQ15517 529 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 TCTN3Q6NUS6 607 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 LARP4Q71RC2 724 aaKnown RBP eCLIP6.38□□□□□ -1.39
BRCA1-217ENST00000487825 CXXC5Q7LFL8 322 aaKnown RBP6.38□□□□□ -1.39
BRCA1-217ENST00000487825 SPRED1Q7Z699 444 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 Q8TCH9 128 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 PIGBQ92521 554 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 DLG3Q92796 817 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 LTV1Q96GA3 475 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-217ENST00000487825 GPR101Q96P66 508 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-217ENST00000487825 KIAA1683Q9H0B3 1180 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 OR10A5Q9H207 317 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 ABT1Q9ULW3 272 aaKnown RBP6.38□□□□□ -1.39
BRCA1-217ENST00000487825 TSC22D4Q9Y3Q8 395 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 SBNO2Q9Y2G9 1366 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 SLX4Q8IY92 1834 aa6.38□□□□□ -1.39
BRCA1-217ENST00000487825 MAP3K19Q56UN5 1328 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 C1QTNF3-AMACRE9PGA6 284 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 M0R2C6 588 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 DDNO94850 711 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-217ENST00000487825 TNFRSF1AP19438 455 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 MAP2K2P36507 400 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 CATSPEREQ5SY80 951 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 KANK2Q63ZY3 851 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 NME9Q86XW9 330 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 TMPRSS5Q9H3S3 457 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 SAMD15Q9P1V8 674 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 FBXO10Q9UK96 956 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 NR2E1Q9Y466 385 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 TCAF1Q9Y4C2 921 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 CENPFP49454 3210 aa6.37□□□□□ -1.39
BRCA1-217ENST00000487825 INSRP06213 1382 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 EVC2Q86UK5 1308 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 GOLGA6L22H0YM25 854 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 POLRMTO00411 1230 aaKnown RBP6.36□□□□□ -1.39
BRCA1-217ENST00000487825 CYP27B1O15528 508 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 NPTXRO95502 500 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 RFC4P35249 363 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 MOGSQ13724 837 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 EIF4HQ15056 248 aaKnown RBP6.36□□□□□ -1.39
BRCA1-217ENST00000487825 TBR1Q16650 682 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 ZMAT1Q5H9K5 638 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 DDX53Q86TM3 631 aaKnown RBP6.36□□□□□ -1.39
BRCA1-217ENST00000487825 SH3TC2Q8TF17 1288 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 SCYL1Q96KG9 808 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 CDK5RAP1Q96SZ6 601 aaKnown RBP6.36□□□□□ -1.39
BRCA1-217ENST00000487825 DPYSL5Q9BPU6 564 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 C12orf65Q9H3J6 166 aaKnown RBP6.36□□□□□ -1.39
BRCA1-217ENST00000487825 ZFR2Q9UPR6 939 aaKnown RBP6.36□□□□□ -1.39
BRCA1-217ENST00000487825 ANKRD26Q9UPS8 1709 aa6.36□□□□□ -1.39
BRCA1-217ENST00000487825 EDC4Q6P2E9 1401 aaKnown RBP6.35□□□□□ -1.39
BRCA1-217ENST00000487825 RTL1A6NKG5 1358 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 USP42Q9H9J4 1324 aaKnown RBP6.35□□□□□ -1.39
BRCA1-217ENST00000487825 A0A0G2JNJ9 132 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 PPP1R12AO14974 1030 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-217ENST00000487825 OPA1O60313 960 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 GLRX3O76003 335 aaKnown RBP6.35□□□□□ -1.39
BRCA1-217ENST00000487825 ZBTB48P10074 688 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-217ENST00000487825 SDHAP31040 664 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 HOXC9P31274 260 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 SELENOPP49908 381 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 ZNF460Q14592 562 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 PCOLCEQ15113 449 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 CCDC144BQ3MJ40 725 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 ZCCHC8Q6NZY4 707 aaKnown RBP6.35□□□□□ -1.39
BRCA1-217ENST00000487825 FILIP1Q7Z7B0 1213 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.35□□□□□ -1.39
BRCA1-217ENST00000487825 CNTROBQ8N137 903 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 RAPGEF4Q8WZA2 1011 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 BOCQ9BWV1 1114 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 DDX21Q9NR30 783 aaKnown RBP eCLIP6.35□□□□□ -1.39
BRCA1-217ENST00000487825 Q9UFV3 132 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 FAM184BQ9ULE4 1060 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 ASAP1Q9ULH1 1129 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 ASB1Q9Y576 335 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 TNPO3Q9Y5L0 923 aaKnown RBP6.35□□□□□ -1.39
BRCA1-217ENST00000487825 UNC80Q8N2C7 3258 aa6.35□□□□□ -1.39
BRCA1-217ENST00000487825 HTTP42858 3142 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 TRIOBPQ9H2D6 2365 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 CDC14BO60729 498 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 RPS6KA4O75676 772 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 DNAJC8O75937 253 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-217ENST00000487825 CR2P20023 1033 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 IGFALSP35858 605 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 STAT5BP51692 787 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 ZXDAP98168 799 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 GRM1Q13255 1194 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 FNDC3BQ53EP0 1204 aaKnown RBP6.34□□□□□ -1.39
BRCA1-217ENST00000487825 GRAMD4Q6IC98 578 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 RTKN2Q8IZC4 609 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 FUKQ8N0W3 1084 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 DRC1Q96MC2 740 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 OAZ3Q9UMX2 235 aa6.34□□□□□ -1.39
BRCA1-217ENST00000487825 PAPPA2Q9BXP8 1791 aa6.34□□□□□ -1.4
BRCA1-217ENST00000487825 B4E1Z4 1266 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 MUSKO15146 869 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 ARHGAP6O43182 974 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms