RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 MAFO75444 373 aaPredicted RBP18.27■□□□□ 0.52
TOM1-214ENST00000487670 NCLP19338 710 aaKnown RBP18.27■□□□□ 0.52
TOM1-214ENST00000487670 HOXC13P31276 330 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 PRKCQQ04759 706 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 PFKFB3Q16875 520 aaPredicted RBP18.27■□□□□ 0.52
TOM1-214ENST00000487670 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 FUT10Q6P4F1 479 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 ANO5Q75V66 913 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 GPR161Q8N6U8 529 aaKnown RBP18.27■□□□□ 0.52
TOM1-214ENST00000487670 ING5Q8WYH8 240 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 CLDN23Q96B33 292 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 MBOAT7Q96N66 472 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 PAAF1Q9BRP4 392 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 RBM28Q9NW13 759 aaKnown RBP18.27■□□□□ 0.52
TOM1-214ENST00000487670 IPPQ9Y573 584 aa18.27■□□□□ 0.52
TOM1-214ENST00000487670 AKAP13Q12802 2813 aa18.27■□□□□ 0.51
TOM1-214ENST00000487670 CNTNAP2Q9UHC6 1331 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 GOLGA8AA7E2F4 631 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 GOLGA8BA8MQT2 603 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 hCG_1984214I3L0E3 225 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 SLC30A4O14863 429 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 GAS7O60861 476 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 NPEPPSP55786 919 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 RTP2Q5QGT7 225 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 LRCH2Q5VUJ6 765 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 REXO1Q8N1G1 1221 aaKnown RBP18.26■□□□□ 0.51
TOM1-214ENST00000487670 ZNF713Q8N859 430 aaPredicted RBP18.26■□□□□ 0.51
TOM1-214ENST00000487670 HDAC7Q8WUI4 952 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 CPB2Q96IY4 423 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 APOL6Q9BWW8 343 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 ZMYND12Q9H0C1 365 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 HEBP1Q9NRV9 189 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 FBXW11Q9UKB1 542 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 COL4A3BPQ9Y5P4 624 aa18.26■□□□□ 0.51
TOM1-214ENST00000487670 ZBTB43O43298 467 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 PSMD10O75832 226 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 ADD1P35611 737 aaKnown RBP18.25■□□□□ 0.51
TOM1-214ENST00000487670 DMWDQ09019 674 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 SRSF5Q13243 272 aaKnown RBP18.25■□□□□ 0.51
TOM1-214ENST00000487670 XKR3Q5GH77 459 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 ZBTB41Q5SVQ8 909 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 B3GNT9Q6UX72 402 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 MIER3Q7Z3K6 550 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 ZNF687Q8N1G0 1237 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 GSTCDQ8NEC7 633 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 HASPINQ8TF76 798 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 TMEM143Q96AN5 459 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 TEKT3Q9BXF9 490 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 OSBPL6Q9BZF3 934 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 KANSL3Q9P2N6 904 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 WRAP73Q9P2S5 460 aaPredicted RBP18.25■□□□□ 0.51
TOM1-214ENST00000487670 STK39Q9UEW8 545 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 GMEB2Q9UKD1 530 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 SSX2IPQ9Y2D8 614 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 IGF2RP11717 2491 aa18.25■□□□□ 0.51
TOM1-214ENST00000487670 FASNP49327 2511 aaKnown RBP18.24■□□□□ 0.51
TOM1-214ENST00000487670 ESYT2A0FGR8 921 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 DDX11L8A8MPP1 907 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 SRGAP2CP0DJJ0 459 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 ITGA4P13612 1032 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 JAK3P52333 1124 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 NECTIN1Q15223 517 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 TEX2Q8IWB9 1127 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 NPAS3Q8IXF0 933 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 SECISBP2LQ93073 1101 aaKnown RBP18.24■□□□□ 0.51
TOM1-214ENST00000487670 PHF20Q9BVI0 1012 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 INO80BQ9C086 356 aaPredicted RBP18.24■□□□□ 0.51
TOM1-214ENST00000487670 NXF3Q9H4D5 531 aaKnown RBP18.24■□□□□ 0.51
TOM1-214ENST00000487670 FNIP2Q9P278 1114 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 DPP7Q9UHL4 492 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 NBEAQ8NFP9 2946 aa18.24■□□□□ 0.51
TOM1-214ENST00000487670 KLF18A0A0U1RQI7 1052 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 TBC1D4O60343 1298 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 TDP2O95551 362 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 DNM2P50570 870 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 ELMSAN1Q6PJG2 1045 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 CDR2LQ86X02 465 aaPredicted RBP18.23■□□□□ 0.51
TOM1-214ENST00000487670 NETO1Q8TDF5 533 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 RIT2Q99578 217 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 CLSTN3Q9BQT9 956 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 GLT8D2Q9H1C3 349 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 CXCL16Q9H2A7 254 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 NDRG2Q9UN36 371 aaKnown RBP18.23■□□□□ 0.51
TOM1-214ENST00000487670 POLIQ9UNA4 740 aa18.23■□□□□ 0.51
TOM1-214ENST00000487670 EML1O00423 815 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 C8AP07357 584 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 IGFBP6P24592 240 aaPredicted RBP18.22■□□□□ 0.51
TOM1-214ENST00000487670 SFNP31947 248 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 EXOSC10Q01780 885 aaKnown RBP18.22■□□□□ 0.51
TOM1-214ENST00000487670 SLC5A9Q2M3M2 681 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 USP41Q3LFD5 358 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 ADCK5Q3MIX3 580 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 SYNE3Q6ZMZ3 975 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 PRR23BQ6ZRT6 265 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 MTSS1LQ765P7 747 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 PRPF31Q8WWY3 499 aaKnown RBP18.22■□□□□ 0.51
TOM1-214ENST00000487670 KLK14Q9P0G3 267 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 ADAM28Q9UKQ2 775 aa18.22■□□□□ 0.51
TOM1-214ENST00000487670 TSPAN1O60635 241 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms