RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TTLL13PA6NNM8 815 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 TEX28O15482 410 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 URODP06132 367 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 MTMR3Q13615 1198 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 SLC27A1Q6PCB7 646 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 UBALD2Q8IYN6 164 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 TDRD5Q8NAT2 981 aaKnown RBP13.52□□□□□ -0.25
VPS16-208ENST00000487461 C8orf76Q96K31 380 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 COLEC11Q9BWP8 271 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 FZD8Q9H461 694 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 RXFP1Q9HBX9 757 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 SSX2IPQ9Y2D8 614 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 WDFY4Q6ZS81 3184 aa13.52□□□□□ -0.25
VPS16-208ENST00000487461 ARID2Q68CP9 1835 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 SPDYE4A6NLX3 237 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 NR1I2O75469 434 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 MYBP10242 640 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 RPA1P27694 616 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 PTPN5P54829 565 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 DSG1Q02413 1049 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 ECM1Q16610 540 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 CDCA2Q69YH5 1023 aaPredicted RBP13.51□□□□□ -0.25
VPS16-208ENST00000487461 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 HACE1Q8IYU2 909 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 MCPH1Q8NEM0 835 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 BSNDQ8WZ55 320 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 B3GALT6Q96L58 329 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 PRRX2Q99811 253 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 LLPHQ9BRT6 129 aaKnown RBP13.51□□□□□ -0.25
VPS16-208ENST00000487461 GPR62Q9BZJ7 368 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 FOXP1Q9H334 677 aaPredicted RBP13.51□□□□□ -0.25
VPS16-208ENST00000487461 MAN1C1Q9NR34 630 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 CHST7Q9NS84 486 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 PARP2Q9UGN5 583 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 USP20Q9Y2K6 914 aa13.51□□□□□ -0.25
VPS16-208ENST00000487461 CCDC195A0A1B0GUA6 201 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 OR52Z1P0C646 297 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 SPATA31D3P0C874 917 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 CYP11B2P19099 503 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 GLUD2P49448 558 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 FAM187BQ17R55 369 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 PADI6Q6TGC4 694 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 C15orf39Q6ZRI6 1047 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 SPATA31D4Q6ZUB0 917 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 CCDC149Q6ZUS6 474 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 C4orf32Q8N8J7 132 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 CMASQ8NFW8 434 aaPredicted RBP13.5□□□□□ -0.25
VPS16-208ENST00000487461 FBXO18Q8NFZ0 1043 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 PRIMPOLQ96LW4 560 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 KIF2CQ99661 725 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 POLD4Q9HCU8 107 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 PRMT7Q9NVM4 692 aaPredicted RBP13.5□□□□□ -0.25
VPS16-208ENST00000487461 CACNG4Q9UBN1 327 aa13.5□□□□□ -0.25
VPS16-208ENST00000487461 ARHGEF35A5YM69 484 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 GLUD1P00367 558 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 ADH1AP07327 375 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
VPS16-208ENST00000487461 GRIK3Q13003 919 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
VPS16-208ENST00000487461 NBR1Q14596 966 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 USP41Q3LFD5 358 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 FUT10Q6P4F1 479 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 OTOP3Q7RTS5 596 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 PALB2Q86YC2 1186 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 ZBTB8OSQ8IWT0 167 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 ERMNQ8TAM6 284 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 ACSF2Q96CM8 615 aaPredicted RBP13.49□□□□□ -0.25
VPS16-208ENST00000487461 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
VPS16-208ENST00000487461 PAAF1Q9BRP4 392 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 CXCL16Q9H2A7 254 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 PDZD7Q9H5P4 517 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 SNTG2Q9NY99 539 aa13.49□□□□□ -0.25
VPS16-208ENST00000487461 ACKR2O00590 384 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 N4BP1O75113 896 aaKnown RBP13.48□□□□□ -0.25
VPS16-208ENST00000487461 TADA2AO75478 443 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 RFPL2O75678 378 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 EDN1P05305 212 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 LIG1P18858 919 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 PRPF4BQ13523 1007 aaKnown RBP13.48□□□□□ -0.25
VPS16-208ENST00000487461 LILRA6Q6PI73 481 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 NOSTRINQ8IVI9 506 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 RIN2Q8WYP3 895 aaPredicted RBP13.48□□□□□ -0.25
VPS16-208ENST00000487461 CCDC113Q9H0I3 377 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 C2orf40Q9H1Z8 148 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 KCNK12Q9HB15 430 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 WDR6Q9NNW5 1121 aaKnown RBP13.48□□□□□ -0.25
VPS16-208ENST00000487461 FNIP2Q9P278 1114 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 ADAM28Q9UKQ2 775 aa13.48□□□□□ -0.25
VPS16-208ENST00000487461 CACNA1HO95180 2353 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 ZMYM2Q9UBW7 1377 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 PTGESO14684 152 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 N4BP3O15049 544 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 TGM5O43548 720 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 PAPLNO95428 1278 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 PRKCBP05771 671 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 RPL17P18621 184 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms