RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 GRM5P41594 1212 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 SCNN1GP51170 649 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 KCNQ1P51787 676 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 COASYQ13057 564 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 SMAD4Q13485 552 aaKnown RBP11.29□□□□□ -0.6
RNF220-215ENST00000487332 KARSQ15046 597 aaKnown RBP11.29□□□□□ -0.6
RNF220-215ENST00000487332 ARSHQ5FYA8 562 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 NT5DC1Q5TFE4 455 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 TMEM173Q86WV6 379 aaPredicted RBP11.29□□□□□ -0.6
RNF220-215ENST00000487332 ZNF280BQ86YH2 543 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 LINC00301Q8NCQ3 95 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 LRRC15Q8TF66 581 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
RNF220-215ENST00000487332 RPS6KC1Q96S38 1066 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 GAD1Q99259 594 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 ACO2Q99798 780 aaKnown RBP11.29□□□□□ -0.6
RNF220-215ENST00000487332 REEP2Q9BRK0 252 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 HERC2P3Q9BVR0 1158 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 RNF39Q9H2S5 420 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 ST6GALNAC4Q9H4F1 302 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 MARCH5Q9NX47 278 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 DNAJB4Q9UDY4 337 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 HES2Q9Y543 173 aa11.29□□□□□ -0.6
RNF220-215ENST00000487332 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.29□□□□□ -0.6
RNF220-215ENST00000487332 C2orf71A6NGG8 1288 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 CCDC169A6NNP5 214 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 TNFRSF10AO00220 468 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 ABLIM1O14639 778 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 NRP1O14786 923 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 TOM1L1O75674 476 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 RECQL4O94761 1208 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 F13A1P00488 732 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 POMCP01189 267 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 PIGRP01833 764 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 SOD2P04179 222 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 ALDH2P05091 517 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 MCF2P10911 925 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 MARCKSP29966 332 aaPredicted RBP11.28□□□□□ -0.6
RNF220-215ENST00000487332 DDIT3P35638 169 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 NRIP1P48552 1158 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 AFF1P51825 1210 aaKnown RBP11.28□□□□□ -0.6
RNF220-215ENST00000487332 STRN3Q13033 797 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 TUSC3Q13454 348 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 ZRSR1Q15695 479 aaKnown RBP11.28□□□□□ -0.6
RNF220-215ENST00000487332 LONRF3Q496Y0 759 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 XKR4Q5GH76 650 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 EEF1DP3Q658K8 133 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
RNF220-215ENST00000487332 FAM173BQ6P4H8 233 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 MPZL3Q6UWV2 235 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 CCDC73Q6ZRK6 1079 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 GPBP1Q86WP2 473 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
RNF220-215ENST00000487332 SMRP1Q8NCR6 262 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 RASSF8Q8NHQ8 419 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 BCL7CQ8WUZ0 217 aaPredicted RBP11.28□□□□□ -0.6
RNF220-215ENST00000487332 EPSTI1Q96J88 318 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 ZFP42Q96MM3 310 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 CDT1Q9H211 546 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 TLE6Q9H808 572 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 PARVGQ9HBI0 331 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 CD207Q9UJ71 328 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 SSX2IPQ9Y2D8 614 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 FAN1Q9Y2M0 1017 aa11.28□□□□□ -0.6
RNF220-215ENST00000487332 NT5C1B-RDH14C9J2C7 533 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 TMEM189-UBE2V1I3L0A0 370 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 PTGESO14684 152 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 SPTLC2O15270 562 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 SLC16A4O15374 487 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 MBTPS2O43462 519 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 SSBP05455 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
RNF220-215ENST00000487332 HOXB8P17481 243 aaPredicted RBP11.27□□□□□ -0.61
RNF220-215ENST00000487332 AKAP5P24588 427 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 GTF2F1P35269 517 aaKnown RBP eCLIP11.27□□□□□ -0.61
RNF220-215ENST00000487332 NDUFV1P49821 464 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 MCL1Q07820 350 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 STK38Q15208 465 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 PTPN14Q15678 1187 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 NAB2Q15742 525 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 SMAD2Q15796 467 aaKnown RBP11.27□□□□□ -0.61
RNF220-215ENST00000487332 TMEM132AQ24JP5 1023 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 ZNF568Q3ZCX4 644 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 PPFIBP1Q86W92 1011 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 CDR2LQ86X02 465 aaPredicted RBP11.27□□□□□ -0.61
RNF220-215ENST00000487332 VPS52Q8N1B4 723 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 CASP10Q92851 521 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 HVCN1Q96D96 273 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 FIZ1Q96SL8 496 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 VN1R3Q9BXE9 311 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 CUEDC2Q9H467 287 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 TOPORSQ9NS56 1045 aaPredicted RBP11.27□□□□□ -0.61
RNF220-215ENST00000487332 MIOSQ9NXC5 875 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 SNTG2Q9NY99 539 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 CLEC1BQ9P126 229 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms