RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TYW1Q9NV66 732 aaKnown RBP7.93□□□□□ -1.14
UBE4B-209ENST00000487244 DACT1Q9NYF0 836 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 HES2Q9Y543 173 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 PCDHGC5Q9Y5F6 944 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 C5orf42Q9H799 3197 aa7.93□□□□□ -1.14
UBE4B-209ENST00000487244 NPHP3-ACAD11A0A0J9YXS1 232 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 HIP1RO75146 1068 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 SSBP05455 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 HSP90AA1P07900 732 aaKnown RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 ARF4P18085 180 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 LIG1P18858 919 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 TFF2Q03403 129 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 RAD51AP2Q09MP3 1159 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 KARSQ15046 597 aaKnown RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 FOXD4L6Q3SYB3 417 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 RINT1Q6NUQ1 792 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 FOXD4L3Q6VB84 417 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 Q6ZNB5 142 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 AGMOQ6ZNB7 445 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 C1orf186Q6ZWK4 172 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 CABP7Q86V35 215 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 KLHL23Q8NBE8 558 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 COLGALT1Q8NBJ5 622 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 SMG8Q8ND04 991 aaKnown RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 MRPL38Q96DV4 380 aaKnown RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 EPSTI1Q96J88 318 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 SAMD11Q96NU1 681 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 CLIC6Q96NY7 704 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 C11orf84Q9BUA3 381 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 TRAIPQ9BWF2 469 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 TMEM117Q9H0C3 514 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 CCDC113Q9H0I3 377 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 CSRNP2Q9H175 543 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 NXF3Q9H4D5 531 aaKnown RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 FBXO2Q9UK22 296 aaPredicted RBP7.92□□□□□ -1.14
UBE4B-209ENST00000487244 PLAGL2Q9UPG8 496 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 DNM3Q9UQ16 869 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 INPP5FQ9Y2H2 1132 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 PCDHB2Q9Y5E7 798 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 BDP1A6H8Y1 2624 aa7.92□□□□□ -1.14
UBE4B-209ENST00000487244 SPTBN5Q9NRC6 3674 aaKnown RBP7.91□□□□□ -1.14
UBE4B-209ENST00000487244 SFI1A8K8P3 1242 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 TNFRSF10AO00220 468 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 EOMESO95936 686 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 BMP15O95972 392 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 PLCG1P19174 1290 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 GTF2F1P35269 517 aaKnown RBP eCLIP7.91□□□□□ -1.14
UBE4B-209ENST00000487244 IRS1P35568 1242 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 NAMPTP43490 491 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 SLC12A3P55017 1021 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 POU5F1BQ06416 359 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 TCEAL5Q5H9L2 206 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 SPOUT1Q5T280 376 aaKnown RBP7.91□□□□□ -1.14
UBE4B-209ENST00000487244 LYPD8Q6UX82 237 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 FAM43BQ6ZT52 329 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-209ENST00000487244 TMEM173Q86WV6 379 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-209ENST00000487244 ABI1Q8IZP0 508 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 LRRC43Q8N309 656 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 DEPTORQ8TB45 409 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 CHAMP1Q96JM3 812 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 APOL6Q9BWW8 343 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 NFKBIZQ9BYH8 718 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 BLOC1S4Q9NUP1 217 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 EVA1BQ9NVM1 165 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 TFIP11Q9UBB9 837 aaKnown RBP7.91□□□□□ -1.14
UBE4B-209ENST00000487244 RWDD3Q9Y3V2 267 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 IPPQ9Y573 584 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 CNTNAP2Q9UHC6 1331 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 CITO14578 2027 aa7.91□□□□□ -1.14
UBE4B-209ENST00000487244 PDCD11Q14690 1871 aaKnown RBP7.9□□□□□ -1.14
UBE4B-209ENST00000487244 A0A087X0B3 334 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 NT5C1B-RDH14C9J2C7 533 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 ZNF623O75123 536 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 ZC3H11AO75152 810 aaKnown RBP eCLIP7.9□□□□□ -1.14
UBE4B-209ENST00000487244 OFD1O75665 1012 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 FGF18O76093 207 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 NPTXRO95502 500 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 PRKCBP05771 671 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 RB1P06400 928 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 PLA2G4BP0C869 781 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 ZSCAN22P10073 491 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-209ENST00000487244 LAG3P18627 525 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 LONP1P36776 959 aaKnown RBP7.9□□□□□ -1.14
UBE4B-209ENST00000487244 MLH1P40692 756 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 UBA7P41226 1012 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 NPTX2P47972 431 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 NASPP49321 788 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-209ENST00000487244 RAB27AP51159 221 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 KCNQ1P51787 676 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 PEX3P56589 373 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 PRR20EP86478 221 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 PRR20CP86479 221 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 PRR20DP86480 221 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 PRR20BP86481 221 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 PRR20AP86496 221 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 DHX8Q14562 1220 aaKnown RBP7.9□□□□□ -1.14
UBE4B-209ENST00000487244 MCM6Q14566 821 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 SLC39A14Q15043 492 aa7.9□□□□□ -1.14
UBE4B-209ENST00000487244 ARSHQ5FYA8 562 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms