RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PICK1Q9NRD5 415 aa19.38■□□□□ 0.69
PDLIM7-207ENST00000486828 PLAAQ9Y263 795 aa19.38■□□□□ 0.69
PDLIM7-207ENST00000486828 NFASCO94856 1347 aa19.38■□□□□ 0.69
PDLIM7-207ENST00000486828 ARID2Q68CP9 1835 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 A6NNZ2 444 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 TULP2O00295 520 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 CYP26A1O43174 497 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 DAPK3O43293 454 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 MTA2O94776 668 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 PSAPP07602 524 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 GTF2H1P32780 548 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 TUBB8Q3ZCM7 444 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 HELQQ8TDG4 1101 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 ALG3Q92685 438 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 ZKSCAN4Q969J2 545 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 WRNIP1Q96S55 665 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 FAM114A2Q9NRY5 505 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 ZNF214Q9UL59 606 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 UTP11Q9Y3A2 253 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 WDR81Q562E7 1941 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 GOLGA6L10A0A0M3HER8 536 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 RGS20O76081 388 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 HSD17B3P37058 310 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 RTP1P59025 263 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 USP37Q86T82 979 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 SH2D3CQ8N5H7 860 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 UBL4BQ8N7F7 174 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 FBXL13Q8NEE6 735 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 MCPH1Q8NEM0 835 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 NT5C1BQ96P26 610 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 RPS6KC1Q96S38 1066 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 CELF4Q9BZC1 486 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.37■□□□□ 0.691e-6■■■■■ 56
PDLIM7-207ENST00000486828 PDLIM7Q9NR12 457 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 NR2E1Q9Y466 385 aa19.37■□□□□ 0.69
PDLIM7-207ENST00000486828 GRIN2DO15399 1336 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 SYNGAP1Q96PV0 1343 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 DGAT1O75907 488 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 HMGCS2P54868 508 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 SOX10P56693 466 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 GNGT1P63211 74 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 FMO1Q01740 532 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 ENPEPQ07075 957 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 CYP24A1Q07973 514 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 ZNF211Q13398 564 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 NAA35Q5VZE5 725 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 KCTD16Q68DU8 428 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 SWSAP1Q6NVH7 229 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 SLC47A2Q86VL8 602 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 MORC4Q8TE76 937 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 POMGNT1Q8WZA1 660 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 CDHR1Q96JP9 859 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 POP1Q99575 1024 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 JPH1Q9HDC5 661 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 RAB20Q9NX57 234 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 GJA3Q9Y6H8 435 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 ADGRA3Q8IWK6 1321 aa19.36■□□□□ 0.69
PDLIM7-207ENST00000486828 C19orf81C9J6K1 198 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 ATP2A1O14983 1001 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 EIF3HO15372 352 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 MMEP08473 750 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 TMEM132BQ14DG7 1078 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 UAP1Q16222 522 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 EMC10Q5UCC4 262 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 KDM7AQ6ZMT4 941 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 SRLQ86TD4 932 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 TAS1R2Q8TE23 839 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 ATP6V1G3Q96LB4 118 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 ZSWIM1Q9BR11 485 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 RAB17Q9H0T7 212 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 XPNPEP1Q9NQW7 623 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 TOPORSQ9NS56 1045 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 TMOD4Q9NZQ9 345 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 SLC9A2Q9UBY0 812 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 HMGB1P1B2RPK0 211 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 STAM2O75886 525 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 CYP11B1P15538 503 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 GARTP22102 1010 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 MTMR3Q13615 1198 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 DNAJC21Q5F1R6 531 aaKnown RBP19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 CEP85LQ5SZL2 805 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 GPD1LQ8N335 351 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 ERVK-5Q9HDB9 667 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 CYP39A1Q9NYL5 469 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 KIAA1217Q5T5P2 1943 aa19.35■□□□□ 0.69
PDLIM7-207ENST00000486828 H0YGN5 161 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 CYP1A2P05177 515 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 HSPA6P17066 643 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 PDE6CP51160 858 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 DR1Q01658 176 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 CDR2Q01850 454 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 PRKCEQ02156 737 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 DHX34Q14147 1143 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 BRDTQ58F21 947 aaPredicted RBP19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 ABHD15Q6UXT9 468 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 CCDC60Q8IWA6 550 aaPredicted RBP19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 TRIM51Q9BSJ1 452 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 ACAD9Q9H845 621 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 ATP6V0A4Q9HBG4 840 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 TMBIM4Q9HC24 238 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms