RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PLAGL2Q9UPG8 496 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 MRPL42Q9Y6G3 142 aaKnown RBP7.69□□□□□ -1.18
HDAC3-209ENST00000486618 MYO10Q9HD67 2058 aa7.69□□□□□ -1.18
HDAC3-209ENST00000486618 C1QTNF9BB2RNN3 333 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 ENPP3O14638 875 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 STAM2O75886 525 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 LINC00271P0C7V0 271 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 ATF7P17544 494 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-209ENST00000486618 AVPR2P30518 371 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 CHRNA4P43681 627 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 IDH3AP50213 366 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 ARHGAP4P98171 946 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 SP2Q02086 613 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 RAPGEF1Q13905 1077 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 TAF2Q6P1X5 1199 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 C20orf204Q6ZNR8 217 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 CD163Q86VB7 1156 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 HSCBQ8IWL3 235 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 CMTR2Q8IYT2 770 aaKnown RBP7.68□□□□□ -1.18
HDAC3-209ENST00000486618 CHPFQ8IZ52 775 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 ZNF689Q96CS4 500 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-209ENST00000486618 PRIMPOLQ96LW4 560 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 PAIP2Q9BPZ3 127 aaKnown RBP7.68□□□□□ -1.18
HDAC3-209ENST00000486618 ZKSCAN3Q9BRR0 538 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 OSBPL7Q9BZF2 842 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 LRRC27Q9C0I9 530 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 MUC3BQ9H195 1237 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 CCSER2Q9H7U1 834 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 JMJD4Q9H9V9 463 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 CLEC1BQ9P126 229 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 RCAN3Q9UKA8 241 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 LRFN2Q9ULH4 789 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 PRKAB1Q9Y478 270 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 PCDHA1Q9Y5I3 950 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 TRIOO75962 3097 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 NRCAMQ92823 1304 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 KMT2EQ8IZD2 1858 aa7.68□□□□□ -1.18
HDAC3-209ENST00000486618 WDFY4Q6ZS81 3184 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 GOLGA6L6A8MZA4 724 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 GCOM1H8Y6P7 765 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-209ENST00000486618 ZNF213O14771 459 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 PRMT3O60678 531 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 DGKIO75912 1065 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 CSPG5O95196 566 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 CHRNA1P02708 482 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 RPLP2P05387 115 aaKnown RBP7.67□□□□□ -1.18
HDAC3-209ENST00000486618 ITGB1P05556 798 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 POLR2MP0CAP2 368 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 STAG3L1P0CL83 205 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 SPATA31C1P0DKV0 1188 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 SRGAP2BP0DMP2 458 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 GHRP10912 638 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 EPB42P16452 691 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 ICAM3P32942 547 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 NRIP1P48552 1158 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 ADAM17P78536 824 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 TBC1D8BQ0IIM8 1120 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 CCINQ13939 588 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 CAMK1Q14012 370 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 C11orf91Q3C1V1 193 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 LARP1BQ659C4 914 aaKnown RBP7.67□□□□□ -1.18
HDAC3-209ENST00000486618 PHLDB3Q6NSJ2 640 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 METTL7BQ6UX53 244 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 SPPL3Q8TCT6 385 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 OTUD7AQ8TE49 926 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-209ENST00000486618 LMBR1Q8WVP7 490 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 POF1BQ8WVV4 589 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 RPGRIP1Q96KN7 1286 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 PNMA5Q96PV4 448 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 ARPC5LQ9BPX5 153 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 FTHL17Q9BXU8 183 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 TGIF2Q9GZN2 237 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 TLE6Q9H808 572 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 YY1AP1Q9H869 796 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 EHMT1Q9H9B1 1298 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 RC3H2Q9HBD1 1191 aaKnown RBP7.67□□□□□ -1.18
HDAC3-209ENST00000486618 FAM86C1Q9NVL1 165 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 SLC6A14Q9UN76 642 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 LZTS1Q9Y250 596 aa7.67□□□□□ -1.18
HDAC3-209ENST00000486618 USP15Q9Y4E8 981 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-209ENST00000486618 BAZ2BQ9UIF8 2168 aaKnown RBP7.67□□□□□ -1.18
HDAC3-209ENST00000486618 CACNA1AO00555 2505 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 CCDC163A0A0D9SF12 145 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 A0A0D9SFI3 127 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 LOC100996750A0A140TA64 210 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 PABPN1LA6NDY0 278 aaKnown RBP7.66□□□□□ -1.18
HDAC3-209ENST00000486618 KLRF2D3W0D1 207 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 PROB1E7EW31 1015 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 H0Y858 1186 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 OPLAHO14841 1288 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 ZBTB5O15062 677 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 FIBPO43427 364 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 MICAL2O94851 1124 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 FAM163BP0C2L3 166 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 NID1P14543 1247 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 NFKB1P19838 968 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 HOXA13P31271 388 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-209ENST00000486618 GNALP38405 381 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 CASP2P42575 452 aa7.66□□□□□ -1.18
HDAC3-209ENST00000486618 TRAPPC10P48553 1259 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms