RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 KARSQ15046 597 aaKnown RBP12.15□□□□□ -0.46
SNX21-211ENST00000486336 TMEM119Q4V9L6 283 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 NT5DC1Q5TFE4 455 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 ATF7IP2Q5U623 682 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 EEF1DP3Q658K8 133 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 DDX53Q86TM3 631 aaKnown RBP12.15□□□□□ -0.46
SNX21-211ENST00000486336 GPBP1Q86WP2 473 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 DAW1Q8N136 415 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 MRPL43Q8N983 215 aaKnown RBP12.15□□□□□ -0.46
SNX21-211ENST00000486336 BCL7CQ8WUZ0 217 aaPredicted RBP12.15□□□□□ -0.46
SNX21-211ENST00000486336 CDCA3Q99618 268 aaPredicted RBP12.15□□□□□ -0.46
SNX21-211ENST00000486336 TMEM175Q9BSA9 504 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 TIPINQ9BVW5 301 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 APOL5Q9BWW9 433 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 CCDC113Q9H0I3 377 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 GDAQ9Y2T3 454 aa12.15□□□□□ -0.46
SNX21-211ENST00000486336 C2orf71A6NGG8 1288 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 MBTPS2O43462 519 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 SLC26A4O43511 780 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 EDN1P05305 212 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 SRGAP2BP0DMP2 458 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 PLCG1P19174 1290 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 GUCY2CP25092 1073 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 SMTNP53814 917 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 SLC12A3P55017 1021 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 MAPK7Q13164 816 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 MCM6Q14566 821 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 APBB1IPQ7Z5R6 666 aaPredicted RBP12.14□□□□□ -0.47
SNX21-211ENST00000486336 ZBTB33Q86T24 672 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 COLGALT2Q8IYK4 626 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 KCTD17Q8N5Z5 321 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 EPSTI1Q96J88 318 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 CLIC6Q96NY7 704 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 TCHPQ9BT92 498 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 COLEC11Q9BWP8 271 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 MRPL4Q9BYD3 311 aaKnown RBP12.14□□□□□ -0.47
SNX21-211ENST00000486336 ZBP1Q9H171 429 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 ZHX3Q9H4I2 956 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
SNX21-211ENST00000486336 TMEM134Q9H6X4 195 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 CLEC1BQ9P126 229 aa12.14□□□□□ -0.47
SNX21-211ENST00000486336 RBM19Q9Y4C8 960 aaKnown RBP12.14□□□□□ -0.47
SNX21-211ENST00000486336 TTC28Q96AY4 2481 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 FSD2A1L4K1 749 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 C2CD2LO14523 706 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 CLASP2O75122 1294 aaKnown RBP12.13□□□□□ -0.47
SNX21-211ENST00000486336 RECQL4O94761 1208 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 FAM13AO94988 1023 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 GLP2RO95838 553 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 CTSAP10619 480 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 HARSP12081 509 aaKnown RBP12.13□□□□□ -0.47
SNX21-211ENST00000486336 PLS3P13797 630 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 MATR3P43243 847 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNX21-211ENST00000486336 OSTNP61366 133 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 STRN3Q13033 797 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 SMAD4Q13485 552 aaKnown RBP12.13□□□□□ -0.47
SNX21-211ENST00000486336 PTPAQ15257 358 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 DCAF4L1Q3SXM0 396 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 FOXD4L6Q3SYB3 417 aaPredicted RBP12.13□□□□□ -0.47
SNX21-211ENST00000486336 FOXD4L3Q6VB84 417 aaPredicted RBP12.13□□□□□ -0.47
SNX21-211ENST00000486336 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 VN1R2Q8NFZ6 395 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 RABGGTAQ92696 567 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 RAD54LQ92698 747 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 USP28Q96RU2 1077 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 ACO2Q99798 780 aaKnown RBP12.13□□□□□ -0.47
SNX21-211ENST00000486336 TARS2Q9BW92 718 aaKnown RBP12.13□□□□□ -0.47
SNX21-211ENST00000486336 C17orf75Q9HAS0 396 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 CCDC39Q9UFE4 941 aa12.13□□□□□ -0.47
SNX21-211ENST00000486336 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 XIRP2A4UGR9 3374 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 F8W810 466 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 INPPL1O15357 1258 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 TADA2AO75478 443 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 TXLNAP40222 546 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 GRIK3Q13003 919 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 GIT2Q14161 759 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 STK38Q15208 465 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 ZNF568Q3ZCX4 644 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 ARSHQ5FYA8 562 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 USP49Q70CQ1 688 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 TAS1R3Q7RTX0 852 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 TAS1R1Q7RTX1 841 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 GJD3Q8N144 294 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 MYCT1Q8N699 235 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 MSLNLQ96KJ4 702 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 ZNF396Q96N95 335 aaPredicted RBP12.12□□□□□ -0.47
SNX21-211ENST00000486336 VN1R3Q9BXE9 311 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 PANK2Q9BZ23 570 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 CCSER1Q9C0I3 900 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 BLOC1S4Q9NUP1 217 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 KCND2Q9NZV8 630 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 ARHGAP28Q9P2N2 729 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 TFIP11Q9UBB9 837 aaKnown RBP12.12□□□□□ -0.47
SNX21-211ENST00000486336 CACNG4Q9UBN1 327 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 KCNG1Q9UIX4 513 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 FBXO2Q9UK22 296 aaPredicted RBP12.12□□□□□ -0.47
SNX21-211ENST00000486336 TNFSF13BQ9Y275 285 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 SRPRBQ9Y5M8 271 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms