RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 RPS6P62753 249 aaKnown RBP9.27□□□□□ -0.92
GABRE-209ENST00000486255 TFAMQ00059 246 aaKnown RBP9.27□□□□□ -0.92
GABRE-209ENST00000486255 DSG1Q02413 1049 aa9.27□□□□□ -0.92
GABRE-209ENST00000486255 ARHGAP17Q68EM7 881 aa9.27□□□□□ -0.92
GABRE-209ENST00000486255 ZNF507Q8TCN5 953 aa9.27□□□□□ -0.92
GABRE-209ENST00000486255 INPP5DQ92835 1189 aa9.27□□□□□ -0.92
GABRE-209ENST00000486255 SEC16BQ96JE7 1060 aa9.27□□□□□ -0.92
GABRE-209ENST00000486255 ZCCHC17Q9NP64 241 aaKnown RBP9.27□□□□□ -0.92
GABRE-209ENST00000486255 GEMIN8Q9NWZ8 242 aaKnown RBP9.27□□□□□ -0.92
GABRE-209ENST00000486255 MON2Q7Z3U7 1717 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 PXDNLA1KZ92 1463 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 RSPH10B2B2RC85 870 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 E5RI56 91 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 EIF3HO15372 352 aaKnown RBP eCLIP9.27□□□□□ -0.93
GABRE-209ENST00000486255 RSPH10BP0C881 870 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 CHRNA3P32297 505 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 CDC37Q16543 378 aaPredicted RBP9.27□□□□□ -0.93
GABRE-209ENST00000486255 POTEAQ6S8J7 498 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 AGR3Q8TD06 166 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 SDR42E1Q8WUS8 393 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 FAM162AQ96A26 154 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 SLC40A1Q9NP59 571 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 USE1Q9NZ43 259 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 FBXL5Q9UKA1 691 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 TTC7AQ9ULT0 858 aaPredicted RBP9.27□□□□□ -0.93
GABRE-209ENST00000486255 SOX13Q9UN79 622 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 NEURL1BA8MQ27 555 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 TRIM66O15016 1216 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 SEMA3EO15041 775 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 PPIP5K2O43314 1243 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 KCNA2P16389 499 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 ERFP50548 548 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 GPC5P78333 572 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 EN1Q05925 392 aaPredicted RBP9.27□□□□□ -0.93
GABRE-209ENST00000486255 LRRC63Q05C16 580 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 KIAA1755Q5JYT7 1200 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 SEPT12Q8IYM1 358 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 NUP93Q8N1F7 819 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 TERB1Q8NA31 727 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 RNF139Q8WU17 664 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 EDC3Q96F86 508 aaKnown RBP9.27□□□□□ -0.93
GABRE-209ENST00000486255 SLC8A2Q9UPR5 921 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 SETD1BQ9UPS6 1966 aaKnown RBP9.27□□□□□ -0.93
GABRE-209ENST00000486255 MEIS1O00470 390 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 KCNQ3O43525 872 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 GPS1Q13098 491 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 SHPRHQ149N8 1683 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 LRIG3Q6UXM1 1119 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 PPP4R3CPQ6ZMV5 832 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 GPR141Q7Z602 305 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 TRIM69Q86WT6 500 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 PAGR1Q9BTK6 254 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 ZFYVE1Q9HBF4 777 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 SARS2Q9NP81 518 aaKnown RBP9.27□□□□□ -0.93
GABRE-209ENST00000486255 ASNSD1Q9NWL6 643 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 TMEM161AQ9NX61 479 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 NRXN3Q9Y4C0 1643 aa9.27□□□□□ -0.93
GABRE-209ENST00000486255 SH3TC1Q8TE82 1336 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 KRT87PA6NCN2 255 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 F5H423 210 aaPredicted RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 MMP1P03956 469 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 SCP2P22307 547 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 SOX6P35712 828 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 VHLP40337 213 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 HSPA13P48723 471 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 ROR1Q01973 937 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 ANO4Q32M45 955 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 WLSQ5T9L3 541 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 CC2D2BQ6DHV5 1058 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 NLRP9Q7RTR0 991 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 LINC00301Q8NCQ3 95 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 USP15Q9Y4E8 981 aaPredicted RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 PLEKHG2Q9H7P9 1386 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 TOMM70O94826 608 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 GGPS1O95749 300 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 FOSP01100 380 aaPredicted RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 KRT16P08779 473 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 FGFR4P22455 802 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 MXI1P50539 228 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 RNF135Q8IUD6 432 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 MRPL1Q9BYD6 325 aaKnown RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 USP44Q9H0E7 712 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 MAD2L2Q9UI95 211 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 SRPRBQ9Y5M8 271 aaKnown RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 HNRNPH1P31943 449 aaKnown RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 SURF1Q15526 300 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 FASTKD1Q53R41 847 aaKnown RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 CCDC24Q8N4L8 307 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 ATP11CQ8NB49 1132 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 NSUN7Q8NE18 718 aaKnown RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 ST13P5Q8NFI4 369 aaPredicted RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 DDI1Q8WTU0 396 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 EGFL8Q99944 293 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 TSSK1BQ9BXA7 367 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 CD248Q9HCU0 757 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 H2AFY2Q9P0M6 372 aaPredicted RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 GUCA1CO95843 209 aa9.26□□□□□ -0.93
GABRE-209ENST00000486255 DDX5P17844 614 aaKnown RBP9.26□□□□□ -0.93
GABRE-209ENST00000486255 PPP6R3Q5H9R7 873 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms