RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CLCN3P51790 818 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 AK2P54819 239 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 NLRP11P59045 1033 aaKnown RBP9.39□□□□□ -0.91
XRN1-212ENST00000486211 SATB1Q01826 763 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 ITGB3BPQ13352 177 aaPredicted RBP9.39□□□□□ -0.91
XRN1-212ENST00000486211 GRM4Q14833 912 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 SEC23AQ15436 765 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 MCMDC2Q4G0Z9 681 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 ZNF484Q5JVG2 852 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 ELMSAN1Q6PJG2 1045 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 MTSS1LQ765P7 747 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 TAS1R1Q7RTX1 841 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 KXD1Q9BQD3 176 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 IER2Q9BTL4 223 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 HERC2P3Q9BVR0 1158 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 TRAIPQ9BWF2 469 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 PLEKHA4Q9H4M7 779 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 DCTPP1Q9H773 170 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 HEBP1Q9NRV9 189 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 KCNH7Q9NS40 1196 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 ADAMTS20P59510 1910 aa9.39□□□□□ -0.91
XRN1-212ENST00000486211 DDHD2O94830 711 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 CCNE2O96020 404 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 URODP06132 367 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 DARSP14868 501 aaKnown RBP9.38□□□□□ -0.91
XRN1-212ENST00000486211 CNR2P34972 360 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 RBM25P49756 843 aaKnown RBP9.38□□□□□ -0.91
XRN1-212ENST00000486211 CCR3P51677 355 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 NTHL1P78549 312 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 ZNF252P-AS1Q0IIN9 211 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 GAS6Q14393 721 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 PPP2R5DQ14738 602 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 LONRF3Q496Y0 759 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 IFIT1BQ5T764 474 aaKnown RBP9.38□□□□□ -0.91
XRN1-212ENST00000486211 LILRA6Q6PI73 481 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 GLB1LQ6UWU2 654 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 ABHD15Q6UXT9 468 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 CCDC60Q8IWA6 550 aaPredicted RBP9.38□□□□□ -0.91
XRN1-212ENST00000486211 FGF13Q92913 245 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 ZNF668Q96K58 619 aaPredicted RBP9.38□□□□□ -0.91
XRN1-212ENST00000486211 PHF20Q9BVI0 1012 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 SCNM1Q9BWG6 230 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 GBP3Q9H0R5 595 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 MARCH5Q9NX47 278 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 DACT1Q9NYF0 836 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 INPP5FQ9Y2H2 1132 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 MRPS17Q9Y2R5 130 aaKnown RBP9.38□□□□□ -0.91
XRN1-212ENST00000486211 COL4A2P08572 1712 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 IGSF10Q6WRI0 2623 aa9.38□□□□□ -0.91
XRN1-212ENST00000486211 SALL3Q9BXA9 1300 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 K7ESF4 209 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 TGM5O43548 720 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 ZMYND10O75800 440 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 NOVA1P51513 510 aaKnown RBP9.37□□□□□ -0.91
XRN1-212ENST00000486211 AFF1P51825 1210 aaKnown RBP9.37□□□□□ -0.91
XRN1-212ENST00000486211 USP46P62068 366 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 RNASELQ05823 741 aaKnown RBP9.37□□□□□ -0.91
XRN1-212ENST00000486211 GRASPQ7Z6J2 395 aaPredicted RBP9.37□□□□□ -0.91
XRN1-212ENST00000486211 LONP2Q86WA8 852 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 METTL13Q8N6R0 699 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 C12orf50Q8NA57 414 aaPredicted RBP9.37□□□□□ -0.91
XRN1-212ENST00000486211 ITFG1Q8TB96 612 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 CUL5Q93034 780 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 BBC3Q96PG8 261 aaPredicted RBP9.37□□□□□ -0.91
XRN1-212ENST00000486211 ARRDC1-AS1Q9H2J1 176 aa9.37□□□□□ -0.91
XRN1-212ENST00000486211 NDRG2Q9UN36 371 aaKnown RBP9.37□□□□□ -0.91
XRN1-212ENST00000486211 F5P12259 2224 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 ZNF213O14771 459 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 NRP1O14786 923 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 GAS2O43903 313 aaKnown RBP9.36□□□□□ -0.91
XRN1-212ENST00000486211 CSDE1O75534 798 aaKnown RBP9.36□□□□□ -0.91
XRN1-212ENST00000486211 EPN2O95208 641 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 PAPSS2O95340 614 aaPredicted RBP9.36□□□□□ -0.91
XRN1-212ENST00000486211 CAPNS1P04632 268 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 MX1P20591 662 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 HOXC13P31276 330 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 CXCL12P48061 93 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 GLUD2P49448 558 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
XRN1-212ENST00000486211 GPC3P51654 580 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 DSG1Q02413 1049 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 NMIQ13287 307 aaPredicted RBP9.36□□□□□ -0.91
XRN1-212ENST00000486211 PDZD3Q86UT5 571 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 PALB2Q86YC2 1186 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 ADAM32Q8TC27 787 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 PIBF1Q8WXW3 757 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 EVI5LQ96CN4 794 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 MBOAT7Q96N66 472 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 MXRA8Q9BRK3 442 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 SDF4Q9BRK5 362 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 TMEM175Q9BSA9 504 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 UBAC1Q9BSL1 405 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 PLA2G2FQ9BZM2 168 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 CHST12Q9NRB3 414 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 CHST7Q9NS84 486 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 GMPR2Q9P2T1 348 aaKnown RBP9.36□□□□□ -0.91
XRN1-212ENST00000486211 AKT3Q9Y243 479 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 SSX2IPQ9Y2D8 614 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 FAN1Q9Y2M0 1017 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 GPSM3Q9Y4H4 160 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms