RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ALADP13716 330 aa20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 ZRSR1Q15695 479 aaKnown RBP20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 PNMA5Q96PV4 448 aa20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 ADPGKQ9BRR6 497 aa20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 KIFC3Q9BVG8 833 aa20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 RUSC1Q9BVN2 902 aa20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 NT5C3AQ9H0P0 336 aa20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 KLK14Q9P0G3 267 aa20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 USP20Q9Y2K6 914 aa20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 PRG3Q9Y2Y8 225 aaPredicted RBP20.3■□□□□ 0.84
PRPF40A-209ENST00000486100 K7ERI5 159 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 HIP1RO75146 1068 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 BMP15O95972 392 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 EDN1P05305 212 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 PDCP20941 246 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 NPTX2P47972 431 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 PEX3P56589 373 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 PTPN14Q15678 1187 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 DAW1Q8N136 415 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 AK8Q96MA6 479 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 DRC1Q96MC2 740 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 TIPINQ9BVW5 301 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 COLEC11Q9BWP8 271 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 PHF7Q9BWX1 381 aaPredicted RBP20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 MARCH5Q9NX47 278 aa20.29■□□□□ 0.84
PRPF40A-209ENST00000486100 CCDC169A6NNP5 214 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 GPR37L1O60883 481 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 LILRB3O75022 631 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 EFEMP2O95967 443 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 SOD2P04179 222 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 GRIK3Q13003 919 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 TPRNQ4KMQ1 711 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 NT5DC1Q5TFE4 455 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 EEF1DP3Q658K8 133 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 PPFIBP1Q86W92 1011 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 SYT2Q8N9I0 419 aaPredicted RBP20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 RPS6KC1Q96S38 1066 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 TMEM134Q9H6X4 195 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 C17orf75Q9HAS0 396 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 MRPL17Q9NRX2 175 aaKnown RBP20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 SNTG2Q9NY99 539 aa20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
PRPF40A-209ENST00000486100 VPS37CA5D8V6 355 aaPredicted RBP20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 LOC730098B7Z3J9 87 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 SLC26A4O43511 780 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 DCXO43602 365 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 SSBP05455 408 aaKnown RBP eCLIP20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 GUCY2CP25092 1073 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 MAPK7Q13164 816 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 DMP1Q13316 513 aaPredicted RBP20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 DCAF4L1Q3SXM0 396 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 TMEM31Q5JXX7 168 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 ATF7IP2Q5U623 682 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 TAS1R1Q7RTX1 841 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 CABP7Q86V35 215 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 RNF168Q8IYW5 571 aaPredicted RBP20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 SLC22A17Q8WUG5 538 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 CDK5RAP3Q96JB5 506 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 KLHL5Q96PQ7 755 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 PLIN2Q99541 437 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 NTPCRQ9BSD7 190 aaKnown RBP20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 HERC2P3Q9BVR0 1158 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 APOL5Q9BWW9 433 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 EMILIN2Q9BXX0 1053 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 KCNG1Q9UIX4 513 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 SSX2IPQ9Y2D8 614 aa20.27■□□□□ 0.84
PRPF40A-209ENST00000486100 COL9A1P20849 921 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 ITIH3Q06033 890 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 CBX2Q14781 532 aaPredicted RBP20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 SF3A1Q15459 793 aaKnown RBP20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 TMEM119Q4V9L6 283 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 RNF135Q8IUD6 432 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 INTS4Q96HW7 963 aaKnown RBP20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 LRFN3Q9BTN0 628 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 ADAM7Q9H2U9 754 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 KMT5AQ9NQR1 393 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 DZANK1Q9NVP4 752 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 KCND2Q9NZV8 630 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 ARHGAP28Q9P2N2 729 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 TNFSF13BQ9Y275 285 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 PHLPP2Q6ZVD8 1323 aa20.26■□□□□ 0.83
PRPF40A-209ENST00000486100 SFI1A8K8P3 1242 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 RECQL4O94761 1208 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 URODP06132 367 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 THP07101 528 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 CNPP09543 421 aaKnown RBP20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 PLA2G4BP0C869 781 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 EPCAMP16422 314 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 KLRC2P26717 231 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 UBA7P41226 1012 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 SLC12A3P55017 1021 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 TUSC3Q13454 348 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 KIAA0319Q5VV43 1072 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 CES5AQ6NT32 575 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 APBB1IPQ7Z5R6 666 aaPredicted RBP20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 ACO2Q99798 780 aaKnown RBP20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 C11orf16Q9NQ32 467 aa20.25■□□□□ 0.83
PRPF40A-209ENST00000486100 F8W810 466 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 PTGESO14684 152 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 SYT1P21579 422 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms