RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 GPRC5DQ9NZD1 345 aa5.46□□□□□ -1.54
VPS41-213ENST00000485955 SCOCQ9UIL1 159 aa5.46□□□□□ -1.54
VPS41-213ENST00000485955 LEFTY2O00292 366 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 AKR1B10O60218 316 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 PEX11BO96011 259 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 CPEP16870 476 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 ZFP36P26651 326 aaKnown RBP5.45□□□□□ -1.54
VPS41-213ENST00000485955 ERVK-21P61565 698 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 METTL24Q5JXM2 366 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 PRAMEF14Q5SWL7 426 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 BTNL9Q6UXG8 535 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 SYT12Q8IV01 421 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 REPS2Q8NFH8 660 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 AUTS2Q8WXX7 1259 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 TRIM8Q9BZR9 551 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 ZNF768Q9H5H4 540 aaKnown RBP5.45□□□□□ -1.54
VPS41-213ENST00000485955 DMRT3Q9NQL9 472 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 HDAC5Q9UQL6 1122 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 PRKAB1Q9Y478 270 aa5.45□□□□□ -1.54
VPS41-213ENST00000485955 SBNO2Q9Y2G9 1366 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 AHRRA9YTQ3 701 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 GASTP01350 101 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 MAKP20794 623 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 APOBEC3AP31941 199 aaPredicted RBP5.44□□□□□ -1.54
VPS41-213ENST00000485955 PPP3CAQ08209 521 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 MST1LQ2TV78 715 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 RNF219Q5W0B1 726 aaPredicted RBP5.44□□□□□ -1.54
VPS41-213ENST00000485955 Q6ZPA2 131 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 MRGPREQ86SM8 312 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 DDX42Q86XP3 938 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS41-213ENST00000485955 SPATS2Q86XZ4 545 aaKnown RBP5.44□□□□□ -1.54
VPS41-213ENST00000485955 ZNF276Q8N554 614 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 GPR156Q8NFN8 814 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 ATL2Q8NHH9 583 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 SLC35B2Q8TB61 432 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 CPT1CQ8TCG5 803 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 SLC25A43Q8WUT9 341 aaPredicted RBP5.44□□□□□ -1.54
VPS41-213ENST00000485955 ZNF480Q8WV37 535 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 FATE1Q969F0 183 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 NDC1Q9BTX1 674 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 NRDE2Q9H7Z3 1164 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 SPON1Q9HCB6 807 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 DNAJC28Q9NX36 388 aa5.44□□□□□ -1.54
VPS41-213ENST00000485955 CADPSQ9ULU8 1353 aa5.43□□□□□ -1.54
VPS41-213ENST00000485955 TBKBP1A7MCY6 615 aa5.43□□□□□ -1.54
VPS41-213ENST00000485955 SCAF4O95104 1147 aaKnown RBP5.43□□□□□ -1.54
VPS41-213ENST00000485955 OSMP13725 252 aa5.43□□□□□ -1.54
VPS41-213ENST00000485955 HSP90B1P14625 803 aaKnown RBP5.43□□□□□ -1.54
VPS41-213ENST00000485955 CRHR1P34998 444 aa5.43□□□□□ -1.54
VPS41-213ENST00000485955 FAM189BP81408 668 aa5.43□□□□□ -1.54
VPS41-213ENST00000485955 FAPQ12884 760 aa5.43□□□□□ -1.54
VPS41-213ENST00000485955 FBXO18Q8NFZ0 1043 aa5.43□□□□□ -1.54
VPS41-213ENST00000485955 SLC2A13Q96QE2 648 aa5.43□□□□□ -1.54
VPS41-213ENST00000485955 KCNH6Q9H252 994 aa5.43□□□□□ -1.54
VPS41-213ENST00000485955 CCM2LQ9NUG4 571 aaPredicted RBP5.43□□□□□ -1.54
VPS41-213ENST00000485955 PRR5-ARHGAP8B1AHC4 643 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 PHF2O75151 1096 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 ADH4P08319 380 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 MTHFD2P13995 350 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 KRT4P19013 534 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 PTPN7P35236 360 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 MTNR1BP49286 362 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 BMT2Q1RMZ1 405 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 RHOUQ7L0Q8 258 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 TRMT2AQ8IZ69 625 aaKnown RBP5.42□□□□□ -1.54
VPS41-213ENST00000485955 AMER2Q8N7J2 671 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 RNF169Q8NCN4 708 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 HOXB13Q92826 284 aaPredicted RBP5.42□□□□□ -1.54
VPS41-213ENST00000485955 HAS1Q92839 578 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 PAWRQ96IZ0 340 aaKnown RBP5.42□□□□□ -1.54
VPS41-213ENST00000485955 TEX101Q9BY14 249 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 ACE2Q9BYF1 805 aaPredicted RBP5.42□□□□□ -1.54
VPS41-213ENST00000485955 IKZF4Q9H2S9 585 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 GREM2Q9H772 168 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 EIF2B4Q9UI10 523 aaKnown RBP5.42□□□□□ -1.54
VPS41-213ENST00000485955 PNPLA7Q6ZV29 1317 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 ATRNL1Q5VV63 1379 aa5.42□□□□□ -1.54
VPS41-213ENST00000485955 K7ESF4 209 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 GSPT1P15170 499 aaKnown RBP5.41□□□□□ -1.54
VPS41-213ENST00000485955 MCAMP43121 646 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 TGFB2P61812 414 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 NHLH2Q02577 135 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 DPTQ07507 201 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 MALLQ13021 153 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 MUM1L1Q5H9M0 696 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 FAM47AQ5JRC9 791 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 DRICH1Q6PGQ1 229 aaPredicted RBP5.41□□□□□ -1.54
VPS41-213ENST00000485955 LDLRAD3Q86YD5 345 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 ULK2Q8IYT8 1036 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 OR7D4Q8NG98 312 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 STON2Q8WXE9 905 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 CHFRQ96EP1 664 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 MLST8Q9BVC4 326 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 BCO1Q9HAY6 547 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 SPC25Q9HBM1 224 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 SLC5A4Q9NY91 659 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 CHST2Q9Y4C5 530 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 PCDHGA2Q9Y5H1 932 aa5.41□□□□□ -1.54
VPS41-213ENST00000485955 B5MCH6 92 aa5.4□□□□□ -1.54
VPS41-213ENST00000485955 TRIM24O15164 1050 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms