RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 KANK3Q6NY19 840 aa15.23■□□□□ 0.03
SCAF4-206ENST00000485790 CCDC149Q6ZUS6 474 aa15.23■□□□□ 0.03
SCAF4-206ENST00000485790 GPR65Q8IYL9 337 aa15.23■□□□□ 0.03
SCAF4-206ENST00000485790 HDAC7Q8WUI4 952 aa15.23■□□□□ 0.03
SCAF4-206ENST00000485790 STAMQ92783 540 aa15.23■□□□□ 0.03
SCAF4-206ENST00000485790 VN1R3Q9BXE9 311 aa15.23■□□□□ 0.03
SCAF4-206ENST00000485790 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCAF4-206ENST00000485790 NOL7Q9UMY1 257 aaKnown RBP15.23■□□□□ 0.03
SCAF4-206ENST00000485790 HES2Q9Y543 173 aa15.23■□□□□ 0.03
SCAF4-206ENST00000485790 MUC6Q6W4X9 2439 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 CCDC195A0A1B0GUA6 201 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 TEX28O15482 410 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 NPTXRO95502 500 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 GLUD1P00367 558 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 OR52Z1P0C646 297 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 CYP11B2P19099 503 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 RPA1P27694 616 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 TRAPPC10P48553 1259 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 DSC1Q08554 894 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 PPP2R5AQ15172 486 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 MAPK6Q16659 721 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 AMHR2Q16671 573 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 PADI6Q6TGC4 694 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 TAS1R1Q7RTX1 841 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 APBB1IPQ7Z5R6 666 aaPredicted RBP15.22■□□□□ 0.03
SCAF4-206ENST00000485790 CMASQ8NFW8 434 aaPredicted RBP15.22■□□□□ 0.03
SCAF4-206ENST00000485790 DEPTORQ8TB45 409 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 IFT74Q96LB3 600 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 ZFP42Q96MM3 310 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 ADPGKQ9BRR6 497 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 HERC2P3Q9BVR0 1158 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 RAB34Q9BZG1 259 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 TMEM60Q9H2L4 133 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 MFSD1Q9H3U5 465 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 FZD8Q9H461 694 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 PLEKHA4Q9H4M7 779 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 RXFP1Q9HBX9 757 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 MIOSQ9NXC5 875 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 CDH22Q9UJ99 828 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 PIEZO1Q92508 2521 aa15.22■□□□□ 0.03
SCAF4-206ENST00000485790 FNDC1Q4ZHG4 1894 aaPredicted RBP15.21■□□□□ 0.03
SCAF4-206ENST00000485790 POTEMA6NI47 508 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 N4BP3O15049 544 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 B4GALT5O43286 388 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 B4GALT3O60512 393 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 EFNA5P52803 228 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 DSG1Q02413 1049 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 GRIK3Q13003 919 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 PRPF4BQ13523 1007 aaKnown RBP15.21■□□□□ 0.03
SCAF4-206ENST00000485790 PDIA5Q14554 519 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 FAM187BQ17R55 369 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 HAUS3Q68CZ6 603 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 CCDC83Q8IWF9 413 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 FBXO18Q8NFZ0 1043 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 PIDD1Q9HB75 910 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 SH2B1Q9NRF2 756 aaPredicted RBP15.21■□□□□ 0.03
SCAF4-206ENST00000485790 CHST7Q9NS84 486 aa15.21■□□□□ 0.03
SCAF4-206ENST00000485790 MED24O75448 989 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 BRD1O95696 1058 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 TDGQ13569 410 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 PALB2Q86YC2 1186 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 NOSTRINQ8IVI9 506 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 ATOH1Q92858 354 aaPredicted RBP15.2■□□□□ 0.02
SCAF4-206ENST00000485790 RHOBTB2Q9BYZ6 727 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 NXF3Q9H4D5 531 aaKnown RBP15.2■□□□□ 0.02
SCAF4-206ENST00000485790 GPRC5CQ9NQ84 441 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 MAN1C1Q9NR34 630 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 MARCH5Q9NX47 278 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 KLK14Q9P0G3 267 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 FNIP2Q9P278 1114 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 IGSF9Q9P2J2 1179 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 LRWD1Q9UFC0 647 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 ADAM28Q9UKQ2 775 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 ZMYM2Q9UBW7 1377 aa15.2■□□□□ 0.02
SCAF4-206ENST00000485790 LOXHD1Q8IVV2 1947 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 ACKR2O00590 384 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 THP07101 528 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 ASGR2P07307 311 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 LIG1P18858 919 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 CCT6AP40227 531 aaKnown RBP15.19■□□□□ 0.02
SCAF4-206ENST00000485790 NAMPTP43490 491 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 CLCN5P51795 746 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 ELAVL2Q12926 359 aaKnown RBP15.19■□□□□ 0.02
SCAF4-206ENST00000485790 TUSC3Q13454 348 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 HSP90AA2PQ14568 343 aaPredicted RBP15.19■□□□□ 0.02
SCAF4-206ENST00000485790 TTC38Q5R3I4 469 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 PDXDC1Q6P996 788 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 CDR2LQ86X02 465 aaPredicted RBP15.19■□□□□ 0.02
SCAF4-206ENST00000485790 PRSS33Q8NF86 280 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 RIN2Q8WYP3 895 aaPredicted RBP15.19■□□□□ 0.02
SCAF4-206ENST00000485790 KIFAP3Q92845 792 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 NXPE3Q969Y0 559 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 WDR6Q9NNW5 1121 aaKnown RBP15.19■□□□□ 0.02
SCAF4-206ENST00000485790 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.19■□□□□ 0.02
SCAF4-206ENST00000485790 KCNG1Q9UIX4 513 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 DNM3Q9UQ16 869 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 KIF3AQ9Y496 699 aa15.19■□□□□ 0.02
SCAF4-206ENST00000485790 SF3B1O75533 1304 aaKnown RBP eCLIP15.18■□□□□ 0.022e-6■■■■■ 46.2
SCAF4-206ENST00000485790 K7ERI5 159 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms