RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 PSMC5P62195 406 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 PRKCEQ02156 737 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 SCRN1Q12765 414 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 STK3Q13188 491 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 ZNF211Q13398 564 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 CCINQ13939 588 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 BTG3Q14201 252 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 SAFBQ15424 915 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 CCDC85BQ15834 202 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 EPC2Q52LR7 807 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 SLC24A5Q71RS6 500 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 OTUD6AQ7L8S5 288 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 MIER3Q7Z3K6 550 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 MICALL1Q8N3F8 863 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 GALNT6Q8NCL4 622 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 RASGRP4Q8TDF6 673 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 P2RX5Q93086 422 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 MBOAT7Q96N66 472 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 PNMA5Q96PV4 448 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 LLPHQ9BRT6 129 aaKnown RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 PHF20Q9BVI0 1012 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 ELAC1Q9H777 363 aaKnown RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 CERS4Q9HA82 394 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 AVENQ9NQS1 362 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 FAM13BQ9NYF5 915 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 ORC3Q9UBD5 711 aaPredicted RBP6.91□□□□□ -1.3
PTCD3-215ENST00000484203 TPCN1Q9ULQ1 816 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 PADI3Q9ULW8 664 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 GINS2Q9Y248 185 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 KIF3AQ9Y496 699 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 TELO2Q9Y4R8 837 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 PCDHB7Q9Y5E2 793 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 ADGRA3Q8IWK6 1321 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 LCTP09848 1927 aa6.91□□□□□ -1.3
PTCD3-215ENST00000484203 OIP5O43482 229 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 LPXNO60711 386 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 DGKIO75912 1065 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 P4HBP07237 508 aaKnown RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 EIF4BP23588 611 aaKnown RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 MPSTP25325 297 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 CTNNB1P35222 781 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 KRT2P35908 639 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 QARSP47897 775 aaKnown RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 NEK4P51957 841 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 AK2P54819 239 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 HMGN5P82970 282 aaKnown RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 UBE3AQ05086 875 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 PPP2R5CQ13362 524 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 ORC2Q13416 577 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 GPM6BQ13491 265 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 BMS1Q14692 1282 aaKnown RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 PCBP1Q15365 356 aaKnown RBP eCLIP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 TCTN1Q2MV58 587 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 LETM2Q2VYF4 491 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 PDE12Q6L8Q7 609 aaKnown RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 EFCAB12Q6NXP0 572 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 ZNF410Q86VK4 478 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 ATCAYQ86WG3 371 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 ETNPPLQ8TBG4 499 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 GPR152Q8TDT2 470 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 SLC7A3Q8WY07 619 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 PIK3R5Q8WYR1 880 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 GTF3C6Q969F1 213 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 ZNF689Q96CS4 500 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 ZSCAN31Q96LW9 406 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 SCLT1Q96NL6 688 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 UHRF1Q96T88 793 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 GCOM2Q9BZD3 368 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 GSX2Q9BZM3 304 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 AGO3Q9H9G7 860 aaKnown RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 UPF2Q9HAU5 1272 aaKnown RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 CHST12Q9NRB3 414 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 SH2B1Q9NRF2 756 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-215ENST00000484203 ENAMQ9NRM1 1142 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 RGS18Q9NS28 235 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 DACT1Q9NYF0 836 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 STK39Q9UEW8 545 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 KLF15Q9UIH9 416 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 LIMCH1Q9UPQ0 1083 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 AKT3Q9Y243 479 aa6.9□□□□□ -1.3
PTCD3-215ENST00000484203 VCANP13611 3396 aa6.9□□□□□ -1.31
PTCD3-215ENST00000484203 EPOPA6NHQ4 379 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 ZBTB42B2RXF5 422 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 ASAP2O43150 1006 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 CHMP2AO43633 222 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 CCNT1O60563 726 aaKnown RBP6.89□□□□□ -1.31
PTCD3-215ENST00000484203 GPR32O75388 356 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 FAM13AO94988 1023 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 TDP2O95551 362 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 EOMESO95936 686 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 PDIA4P13667 645 aaKnown RBP6.89□□□□□ -1.31
PTCD3-215ENST00000484203 SFPQP23246 707 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTCD3-215ENST00000484203 PPM1AP35813 382 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 MARSP56192 900 aaKnown RBP6.89□□□□□ -1.31
PTCD3-215ENST00000484203 NCBP1Q09161 790 aaKnown RBP6.89□□□□□ -1.31
PTCD3-215ENST00000484203 INF2Q27J81 1249 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 KIZQ2M2Z5 673 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 B3GNT9Q6UX72 402 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 SLCO4C1Q6ZQN7 724 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 C1orf229Q6ZS94 237 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms