RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 IRX1P78414 480 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-216ENST00000484134 CALCOCO2Q13137 446 aa21.18■□□□□ 0.98
RPUSD3-216ENST00000484134 BLMHQ13867 455 aa21.18■□□□□ 0.98
RPUSD3-216ENST00000484134 SHROOM1Q2M3G4 852 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-216ENST00000484134 C1orf186Q6ZWK4 172 aa21.18■□□□□ 0.98
RPUSD3-216ENST00000484134 ARMC2Q8NEN0 867 aa21.18■□□□□ 0.98
RPUSD3-216ENST00000484134 CDCA7Q9BWT1 371 aaPredicted RBP21.18■□□□□ 0.98
RPUSD3-216ENST00000484134 ACP6Q9NPH0 428 aa21.18■□□□□ 0.98
RPUSD3-216ENST00000484134 ECEL1O95672 775 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 FOXN2P32314 431 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 SNX1Q13596 522 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 PTF1AQ7RTS3 328 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 SLC17A8Q8NDX2 589 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 WNT8AQ9H1J5 351 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 SERPINB13Q9UIV8 391 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 MTUS1Q9ULD2 1270 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 COL24A1Q17RW2 1714 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 UPP2O95045 317 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 DLATP10515 647 aaKnown RBP21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 PEX19P40855 299 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 LACTBP83111 547 aaPredicted RBP21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 RNF207Q6ZRF8 634 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 ZNF720Q7Z2F6 126 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 KAT5Q92993 513 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 POLR3CQ9BUI4 534 aaPredicted RBP21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 GLT8D2Q9H1C3 349 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 ETNK1Q9HBU6 452 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 TBK1Q9UHD2 729 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 CORO1CQ9ULV4 474 aaPredicted RBP21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 FRMD4BQ9Y2L6 1034 aa21.17■□□□□ 0.98
RPUSD3-216ENST00000484134 CLDN3O15551 220 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 TTC4O95801 387 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 IVDP26440 423 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 ATP11AP98196 1134 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 KRT17Q04695 432 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 SLC15A2Q16348 729 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 C12orf50Q8NA57 414 aaPredicted RBP21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 FAM20AQ96MK3 541 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 LRRC19Q9H756 370 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 UNC5CO95185 931 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 SGPL1O95470 568 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 AP3B2Q13367 1082 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 RNF43Q68DV7 783 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 C7orf43Q8WVR3 580 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 WHRNQ9P202 907 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 CNTNAP4Q9C0A0 1308 aa21.16■□□□□ 0.98
RPUSD3-216ENST00000484134 FOCADQ5VW36 1801 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 RGL2O15211 777 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 TAC1P20366 129 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 STX2P32856 288 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 RNASELQ05823 741 aaKnown RBP21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 BFSP1Q12934 665 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 MTFR1Q15390 333 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 TRIP13Q15645 432 aaPredicted RBP21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 TPH2Q8IWU9 490 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 HSD17B14Q9BPX1 270 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 PLCD4Q9BRC7 762 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 PARVGQ9HBI0 331 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 KLHL14Q9P2G3 628 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 ZMYND8Q9ULU4 1186 aaPredicted RBP21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 COL16A1Q07092 1604 aaPredicted RBP21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 C10orf71Q711Q0 1435 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 SPOPO43791 374 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 C11orf91Q3C1V1 193 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 TMEM63BQ5T3F8 832 aa21.15■□□□□ 0.98
RPUSD3-216ENST00000484134 A6NHS1 94 aa21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 MTA2O94776 668 aa21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 SLITRK3O94933 977 aa21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 LINGO3P0C6S8 592 aa21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 FAM47EQ6ZV65 393 aa21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 HS2ST1Q7LGA3 356 aa21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 NOP9Q86U38 636 aaKnown RBP21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 PSPC1Q8WXF1 523 aaKnown RBP21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 ATG4AQ8WYN0 398 aa21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 MAGEB18Q96M61 343 aa21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 CHST7Q9NS84 486 aa21.14■□□□□ 0.98
RPUSD3-216ENST00000484134 GNAZP19086 355 aa21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 HOXA13P31271 388 aaPredicted RBP21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 SREBF1P36956 1147 aa21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 TAF11Q15544 211 aa21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 USH1GQ495M9 461 aa21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 SLF2Q8IX21 1173 aa21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 SRRM1Q8IYB3 904 aaKnown RBP21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 NUP85Q9BW27 656 aa21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 MYLK2Q9H1R3 596 aa21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 ASIC3Q9UHC3 531 aa21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 NAALADL1Q9UQQ1 740 aa21.14■□□□□ 0.97
RPUSD3-216ENST00000484134 TAF1LQ8IZX4 1826 aa21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 EMSYQ7Z589 1322 aa21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 GNPATO15228 680 aa21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 EXOC3O60645 756 aa21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 RPS6KA4O75676 772 aa21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 BCRP11274 1271 aa21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 GM2AP17900 193 aa21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 ADRA2BP18089 450 aa21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 SKIV2L2P42285 1042 aaKnown RBP21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 ITGA8P53708 1063 aa21.13■□□□□ 0.97
RPUSD3-216ENST00000484134 PPP3CAQ08209 521 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms