RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SPECC1LQ69YQ0 1117 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 TSHZ1Q6ZSZ6 1077 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 DYMQ7RTS9 669 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 RSPH3Q86UC2 560 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 CREBRFQ8IUR6 639 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 VSTM4Q8IW00 320 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 TPH2Q8IWU9 490 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 PARP9Q8IXQ6 854 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 MAFAQ8NHW3 353 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 PIGOQ8TEQ8 1089 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 DDX12PQ92771 950 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 TMEM143Q96AN5 459 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 TSG101Q99816 390 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 EIF2AK1Q9BQI3 630 aaKnown RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 POLR3CQ9BUI4 534 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 HSD3B7Q9H2F3 369 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 THAP9Q9H5L6 903 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 POLD4Q9HCU8 107 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 SAMSN1Q9NSI8 373 aaKnown RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 MAPK8IP1Q9UQF2 711 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 STXBP5LQ9Y2K9 1186 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 A0A1B0GTH6 734 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 KCNJ18B7U540 433 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 M0QZ92 97 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 N4BP3O15049 544 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 CCP110O43303 1012 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 CAND2O75155 1236 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 MED24O75448 989 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 AMHP03971 560 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 SKILP12757 684 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 EEF1GP26641 437 aaKnown RBP7.61□□□□□ -1.19
BRCA1-216ENST00000484087 QARSP47897 775 aaKnown RBP7.61□□□□□ -1.19
BRCA1-216ENST00000484087 GPC3P51654 580 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 PSMC5P62195 406 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 KCNJ12Q14500 433 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 ECM1Q16610 540 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 IER5Q5VY09 327 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 MAEAQ7L5Y9 396 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 RPAINQ86UA6 219 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 PPFIBP1Q86W92 1011 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 CSGALNACT2Q8N6G5 542 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 KIAA1524Q8TCG1 905 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 NEK9Q8TD19 979 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 CACTINQ8WUQ7 758 aaKnown RBP7.61□□□□□ -1.19
BRCA1-216ENST00000484087 P2RX5Q93086 422 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 FAM167AQ96KS9 214 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 CEP170P1Q96L14 293 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 NLRP4Q96MN2 994 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 SCLT1Q96NL6 688 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 YME1L1Q96TA2 773 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 ADAMTS10Q9H324 1103 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 KCNF1Q9H3M0 494 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 ERVK-5Q9HDB9 667 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 TUFT1Q9NNX1 390 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 XPNPEP1Q9NQW7 623 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 PANK4Q9NVE7 773 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 LIMA1Q9UHB6 759 aaKnown RBP7.61□□□□□ -1.19
BRCA1-216ENST00000484087 ST3GAL5Q9UNP4 418 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 VPS9D1Q9Y2B5 631 aa7.61□□□□□ -1.19
BRCA1-216ENST00000484087 MYO7AQ13402 2215 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 A0A087WZ62 844 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 E9PMD0 336 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 ENPP3O14638 875 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 LPXNO60711 386 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 RPS6KA5O75582 802 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 SLITRK3O94933 977 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 PARNO95453 639 aaKnown RBP7.6□□□□□ -1.19
BRCA1-216ENST00000484087 FGFR1P11362 822 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 YWHABP31946 246 aaKnown RBP7.6□□□□□ -1.19
BRCA1-216ENST00000484087 LRRC63Q05C16 580 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 STK4Q13043 487 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 TRIM14Q14142 442 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 NR1I3Q14994 352 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 EPHA7Q15375 998 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 XKR9Q5GH70 373 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 XKR3Q5GH77 459 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 TCP11X2Q5H9J9 407 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 GPBP1Q86WP2 473 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 CATSPER3Q86XQ3 398 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 RHPN2Q8IUC4 686 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 GUF1Q8N442 669 aaKnown RBP7.6□□□□□ -1.19
BRCA1-216ENST00000484087 SYT2Q8N9I0 419 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-216ENST00000484087 PHOSPHO2Q8TCD6 241 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 LRRC15Q8TF66 581 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 NLRP7Q8WX94 980 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 TOP1MTQ969P6 601 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 NAP1L5Q96NT1 182 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-216ENST00000484087 ARID3AQ99856 593 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 FDXACB1Q9BRP7 624 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-216ENST00000484087 SRRTQ9BXP5 876 aaKnown RBP7.6□□□□□ -1.19
BRCA1-216ENST00000484087 SLC39A2Q9NP94 309 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 GPRC5CQ9NQ84 441 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 CYP26B1Q9NR63 512 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 NRBP2Q9NSY0 501 aa7.6□□□□□ -1.19
BRCA1-216ENST00000484087 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.6□□□□□ -1.193e-6■■□□□ 14.3
BRCA1-216ENST00000484087 TCF20Q9UGU0 1960 aaKnown RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 TMEM265A0A087WTH1 108 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 MEIS3P2A8K0S8 358 aa7.59□□□□□ -1.19
BRCA1-216ENST00000484087 PES1O00541 588 aaKnown RBP7.59□□□□□ -1.19
BRCA1-216ENST00000484087 USO1O60763 962 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms