RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ACKR2O00590 384 aa28.45■■■□□ 2.15
SHOX2-204ENST00000483851 F2P00734 622 aa28.45■■■□□ 2.15
SHOX2-204ENST00000483851 STAT1P42224 750 aa28.45■■■□□ 2.15
SHOX2-204ENST00000483851 CPT1AP50416 773 aa28.45■■■□□ 2.15
SHOX2-204ENST00000483851 CLCN3P51790 818 aa28.45■■■□□ 2.15
SHOX2-204ENST00000483851 PAXIP1Q6ZW49 1069 aaPredicted RBP28.45■■■□□ 2.15
SHOX2-204ENST00000483851 IRF2BP2Q7Z5L9 587 aa28.45■■■□□ 2.15
SHOX2-204ENST00000483851 MSTO1Q9BUK6 570 aa28.45■■■□□ 2.15
SHOX2-204ENST00000483851 EVPLQ92817 2033 aa28.45■■■□□ 2.14
SHOX2-204ENST00000483851 CLDN3O15551 220 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 PLEKP08567 350 aaPredicted RBP28.44■■■□□ 2.14
SHOX2-204ENST00000483851 CCDC172P0C7W6 258 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 FERP16591 822 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 ARHGAP25P42331 645 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 PHKA2P46019 1235 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 GNG11P61952 73 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 KLHL30Q0D2K2 578 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 GRIK4Q16099 956 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 FAM187BQ17R55 369 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 TDRD12Q587J7 1177 aaKnown RBP28.44■■■□□ 2.14
SHOX2-204ENST00000483851 LRRN4CLQ8ND94 238 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 ACO2Q99798 780 aaKnown RBP28.44■■■□□ 2.14
SHOX2-204ENST00000483851 DNAJC12Q9UKB3 198 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 KRT86O43790 486 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 VAV2P52735 878 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 IGBP1P78318 339 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 CCDC127Q96BQ5 260 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 TSGA10Q9BZW7 698 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 AP5M1Q9H0R1 490 aa28.44■■■□□ 2.14
SHOX2-204ENST00000483851 LUC7LQ9NQ29 371 aaKnown RBP28.44■■■□□ 2.14
SHOX2-204ENST00000483851 LACTBP83111 547 aaPredicted RBP28.43■■■□□ 2.14
SHOX2-204ENST00000483851 TSHZ1Q6ZSZ6 1077 aa28.43■■■□□ 2.14
SHOX2-204ENST00000483851 KIAA1328Q86T90 577 aa28.43■■■□□ 2.14
SHOX2-204ENST00000483851 PRMT7Q9NVM4 692 aaPredicted RBP28.43■■■□□ 2.14
SHOX2-204ENST00000483851 KAT6AQ92794 2004 aa28.43■■■□□ 2.14
SHOX2-204ENST00000483851 CTGFP29279 349 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 GPC3P51654 580 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 CDC42EP1Q00587 391 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 CRELD2Q6UXH1 353 aaPredicted RBP28.42■■■□□ 2.14
SHOX2-204ENST00000483851 NLRP4Q96MN2 994 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 HAPLN2Q9GZV7 340 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 NRCAMQ92823 1304 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 EDN1P05305 212 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 AKR1A1P14550 325 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 CASQ1P31415 396 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 MATR3P43243 847 aaKnown RBP eCLIP28.42■■■□□ 2.14
SHOX2-204ENST00000483851 PSMC4P43686 418 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 MCL1Q07820 350 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 GRM1Q13255 1194 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 FBXL13Q8NEE6 735 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 ZBTB45Q96K62 511 aaPredicted RBP28.42■■■□□ 2.14
SHOX2-204ENST00000483851 FNBP1Q96RU3 617 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 ANKFY1Q9P2R3 1169 aa28.42■■■□□ 2.14
SHOX2-204ENST00000483851 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.42■■■□□ 2.14
SHOX2-204ENST00000483851 V9GYY5 206 aaPredicted RBP28.42■■■□□ 2.14
SHOX2-204ENST00000483851 F8VZ95 297 aa28.41■■■□□ 2.14
SHOX2-204ENST00000483851 ECM2O94769 699 aaPredicted RBP28.41■■■□□ 2.14
SHOX2-204ENST00000483851 GFPT2O94808 682 aa28.41■■■□□ 2.14
SHOX2-204ENST00000483851 PROZP22891 400 aa28.41■■■□□ 2.14
SHOX2-204ENST00000483851 SOX5P35711 763 aa28.41■■■□□ 2.14
SHOX2-204ENST00000483851 NLRP11P59045 1033 aaKnown RBP28.41■■■□□ 2.14
SHOX2-204ENST00000483851 MBTD1Q05BQ5 628 aa28.41■■■□□ 2.14
SHOX2-204ENST00000483851 ELF2Q15723 593 aa28.41■■■□□ 2.14
SHOX2-204ENST00000483851 DEFB115Q30KQ5 88 aa28.41■■■□□ 2.14
SHOX2-204ENST00000483851 FAM81BQ96LP2 452 aa28.41■■■□□ 2.14
SHOX2-204ENST00000483851 ZNF263O14978 683 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 ZC3H11AO75152 810 aaKnown RBP eCLIP28.4■■■□□ 2.14
SHOX2-204ENST00000483851 URI1O94763 535 aaPredicted RBP28.4■■■□□ 2.14
SHOX2-204ENST00000483851 SLC18A3Q16572 532 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 MARCH8Q5T0T0 291 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 PHLDB3Q6NSJ2 640 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 C15orf39Q6ZRI6 1047 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 CFHR5Q9BXR6 569 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 IFIH1Q9BYX4 1025 aaKnown RBP28.4■■■□□ 2.14
SHOX2-204ENST00000483851 IFT122Q9HBG6 1241 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 RBAKQ9NYW8 714 aaPredicted RBP28.4■■■□□ 2.14
SHOX2-204ENST00000483851 PCDHA13Q9Y5I0 950 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 A0A0U1RQJ8 604 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 INO80B-WBP1J3KQ70 363 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 KIF5AQ12840 1032 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 PRPF4BQ13523 1007 aaKnown RBP28.4■■■□□ 2.14
SHOX2-204ENST00000483851 DRAP1Q14919 205 aaPredicted RBP28.4■■■□□ 2.14
SHOX2-204ENST00000483851 C10orf76Q5T2E6 689 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 MFSD14CQ5VZR4 134 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 SV2AQ7L0J3 742 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 ZNF410Q86VK4 478 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 VPS36Q86VN1 386 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 ATRIPQ8WXE1 791 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 JAKMIP2Q96AA8 810 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 INO80BQ9C086 356 aaPredicted RBP28.4■■■□□ 2.14
SHOX2-204ENST00000483851 PTPRHQ9HD43 1115 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 TNFSF13BQ9Y275 285 aa28.4■■■□□ 2.14
SHOX2-204ENST00000483851 OGTO15294 1046 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 ZEB2O60315 1214 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 AP3M2P53677 418 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 MAP2K1Q02750 393 aaPredicted RBP28.39■■■□□ 2.14
SHOX2-204ENST00000483851 SURF1Q15526 300 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 CCDC122Q5T0U0 273 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 GJB7Q6PEY0 223 aa28.39■■■□□ 2.14
SHOX2-204ENST00000483851 MPZL3Q6UWV2 235 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms