RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 GANQ9H2C0 597 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 MMRN2Q9H8L6 949 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 HMX1Q9NP08 348 aaPredicted RBP11□□□□□ -0.65
HDAC6-226ENST00000483656 SIX2Q9NPC8 291 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 AGPAT5Q9NUQ2 364 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 PRMT7Q9NVM4 692 aaPredicted RBP11□□□□□ -0.65
HDAC6-226ENST00000483656 TNFSF13BQ9Y275 285 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 PTPN22Q9Y2R2 807 aa11□□□□□ -0.65
HDAC6-226ENST00000483656 A0A1W2PQJ5 194 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 GTPBP10A4D1E9 387 aaKnown RBP10.99□□□□□ -0.65
HDAC6-226ENST00000483656 ZNF233A6NK53 670 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 LRRIQ3A6PVS8 624 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-226ENST00000483656 ESPNB1AK53 854 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 TSPAN1O60635 241 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 GNAT1P11488 350 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 SKILP12757 684 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 ACTN1P12814 892 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 FGFR4P22455 802 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 PON1P27169 355 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 KRT9P35527 623 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 ACOT2P49753 483 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 ACLYP53396 1101 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 ENPEPQ07075 957 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 SEZ6Q53EL9 994 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 ATF7IP2Q5U623 682 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 ZBTB33Q86T24 672 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 CDR2LQ86X02 465 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-226ENST00000483656 LMO3Q8TAP4 145 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 KIAA1524Q8TCG1 905 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 NLRP7Q8WX94 980 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 BAP1Q92560 729 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 PCMTD1Q96MG8 357 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-226ENST00000483656 POP1Q99575 1024 aaKnown RBP10.99□□□□□ -0.65
HDAC6-226ENST00000483656 BEGAINQ9BUH8 593 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 KIAA1586Q9HCI6 787 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 TOPORSQ9NS56 1045 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-226ENST00000483656 FAM207AQ9NSI2 230 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-226ENST00000483656 ANKFY1Q9P2R3 1169 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 CNTNAP2Q9UHC6 1331 aa10.99□□□□□ -0.65
HDAC6-226ENST00000483656 CCDC85CA6NKD9 419 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 PMM2O15305 246 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CLDN3O15551 220 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 LRRN2O75325 713 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 HARSP12081 509 aaKnown RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 DARSP14868 501 aaKnown RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 ARF4P18085 180 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 TNFSF9P41273 254 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 GCLMP48507 274 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CTCFP49711 727 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CLDN10P78369 228 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 ZBED6P86452 979 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CDC42EP1Q00587 391 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 PSMD6Q15008 389 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 EXOC3L4Q17RC7 722 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 EPC2Q52LR7 807 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 KLHDC7AQ5VTJ3 777 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 E4F1Q66K89 784 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 WDR59Q6PJI9 974 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 MPZL3Q6UWV2 235 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 GBP6Q6ZN66 633 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 RNF180Q86T96 592 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CNGA4Q8IV77 575 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 C17orf53Q8N3J3 647 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 NME8Q8N427 588 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 PCSK9Q8NBP7 692 aaKnown RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 NEK11Q8NG66 645 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 TMEM40Q8WWA1 233 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 ZNF516Q92618 1163 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CCDC127Q96BQ5 260 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CCDC51Q96ER9 411 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CPB2Q96IY4 423 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 FAM84AQ96KN4 292 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 PRIMPOLQ96LW4 560 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 DNAJC7Q99615 494 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 OSMRQ99650 979 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 TSEN34Q9BSV6 310 aaKnown RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 GCOM2Q9BZD3 368 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 EDEM3Q9BZQ6 932 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 TMEM117Q9H0C3 514 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 UNC93B1Q9H1C4 597 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CDT1Q9H211 546 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 PDZD7Q9H5P4 517 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 PLCB1Q9NQ66 1216 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 ABHD10Q9NUJ1 306 aa10.98□□□□□ -0.65
HDAC6-226ENST00000483656 AJAP1Q9UKB5 411 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 CPSF3Q9UKF6 684 aaKnown RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 LUC7L2Q9Y383 392 aaKnown RBP10.98□□□□□ -0.65
HDAC6-226ENST00000483656 OGTO15294 1046 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 P4HA2O15460 535 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 MEFVO15553 781 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-226ENST00000483656 LDHAP00338 332 aaKnown RBP10.97□□□□□ -0.65
HDAC6-226ENST00000483656 TPM1P09493 284 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 TRIM21P19474 475 aaKnown RBP10.97□□□□□ -0.65
HDAC6-226ENST00000483656 HOXA11P31270 313 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-226ENST00000483656 MATR3P43243 847 aaKnown RBP eCLIP10.97□□□□□ -0.65
HDAC6-226ENST00000483656 MYL7Q01449 175 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 NOLC1Q14978 699 aaKnown RBP eCLIP10.97□□□□□ -0.65
HDAC6-226ENST00000483656 SNX17Q15036 470 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms