RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 ZBTB10Q96DT7 871 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 IQCDQ96DY2 449 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 ZNF668Q96K58 619 aaPredicted RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 NUP58Q9BVL2 599 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 IKZF4Q9H2S9 585 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 PRMT7Q9NVM4 692 aaPredicted RBP13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 ITIH6Q6UXX5 1313 aa13.59□□□□□ -0.23
TSPAN1-208ENST00000482928 LTBP2Q14767 1821 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 A0A087WZ62 844 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 TISP43B9A030 160 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 KBTBD13C9JR72 458 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 ANKRD63C9JTQ0 380 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 ADAMTS4O75173 837 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 HARSP12081 509 aaKnown RBP13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 CASP4P49662 377 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 NLRP11P59045 1033 aaKnown RBP13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 PTENP60484 403 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 NKX3-2P78367 333 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 CETN1Q12798 172 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 GRIN2CQ14957 1233 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 ZPBP2Q6X784 338 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 ZNF710Q8N1W2 664 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 KCNN1Q92952 543 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 SAAL1Q96ER3 474 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 FDXACB1Q9BRP7 624 aaPredicted RBP13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 MSTO1Q9BUK6 570 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 TARS2Q9BW92 718 aaKnown RBP13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 NFKBIZQ9BYH8 718 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 GCOM2Q9BZD3 368 aaPredicted RBP13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 INTS13Q9NVM9 706 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 DMAC2Q9NW81 257 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 NOD1Q9Y239 953 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 GINS2Q9Y248 185 aa13.58□□□□□ -0.24
TSPAN1-208ENST00000482928 GOLGA8IPA6NC78 632 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 GOLGA8JA6NMD2 632 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 AKR1B15C9JRZ8 316 aaPredicted RBP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 MAPK13O15264 365 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 CLDN3O15551 220 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 N4BP1O75113 896 aaKnown RBP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 PIGRP01833 764 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 RPLP2P05387 115 aaKnown RBP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 TRIM21P19474 475 aaKnown RBP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 MSNP26038 577 aaKnown RBP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 GPC3P51654 580 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 BFSP1Q12934 665 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 SYCP1Q15431 976 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 SNRNP35Q16560 246 aaKnown RBP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 PTPN21Q16825 1174 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 NBPF20Q3BBV1 942 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 MIIPQ5JXC2 388 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 MARCH8Q5T0T0 291 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 TAF2Q6P1X5 1199 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 TAS1R3Q7RTX0 852 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 SRGAP1Q7Z6B7 1085 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 CNGA4Q8IV77 575 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 KIAA0319LQ8IZA0 1049 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 LINC01465Q8N7H1 131 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 ZNF397Q8NF99 534 aaPredicted RBP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 PPP1R13LQ8WUF5 828 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 TMEM174Q8WUU8 243 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 CPLX3Q8WVH0 158 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 GLT1D1Q96MS3 346 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 MMRN2Q9H8L6 949 aa13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 PAK6Q9NQU5 681 aaPredicted RBP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
TSPAN1-208ENST00000482928 SIP14410 1827 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 MBLAC1A4D2B0 266 aaPredicted RBP13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 MOXD2PA6NHM9 499 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 ZNF233A6NK53 670 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 ACKR2O00590 384 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 TREHO43280 583 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 EXTL3O43909 919 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 TOM1L1O75674 476 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 VAMP7P51809 220 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 MBTD1Q05BQ5 628 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 TMEM62Q0P6H9 643 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 KIZQ2M2Z5 673 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 ATF7IP2Q5U623 682 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 ZBTB33Q86T24 672 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 NME8Q8N427 588 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 CCDC112Q8NEF3 446 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 KLHDC9Q8NEP7 349 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 DNAJB3Q8WWF6 145 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 PRIMPOLQ96LW4 560 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 FBXL18Q96ME1 805 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 ERGIC2Q96RQ1 377 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 FAM213AQ9BRX8 229 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 TSEN34Q9BSV6 310 aaKnown RBP13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 CCDC113Q9H0I3 377 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 GTF2IRD1Q9UHL9 959 aa13.56□□□□□ -0.24
TSPAN1-208ENST00000482928 PRR33A8MZF0 331 aa13.55□□□□□ -0.24
TSPAN1-208ENST00000482928 PBX1P40424 430 aa13.55□□□□□ -0.24
TSPAN1-208ENST00000482928 ACLYP53396 1101 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms