RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 ENPP1P22413 925 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 IGBP1P78318 339 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 SLC25A3Q00325 362 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 MRPL49Q13405 166 aaKnown RBP5.07□□□□□ -1.6
GTF3A-207ENST00000482655 PDCD1Q15116 288 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.07□□□□□ -1.6
GTF3A-207ENST00000482655 C1QL3Q5VWW1 255 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 IQSEC1Q6DN90 963 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 LYSMD2Q8IV50 215 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 CPT1CQ8TCG5 803 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 HAS1Q92839 578 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 EAF2Q96CJ1 260 aaPredicted RBP5.07□□□□□ -1.6
GTF3A-207ENST00000482655 RAX2Q96IS3 184 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 SLITRK6Q9H5Y7 841 aa5.07□□□□□ -1.6
GTF3A-207ENST00000482655 EIF2B4Q9UI10 523 aaKnown RBP5.07□□□□□ -1.6
GTF3A-207ENST00000482655 TRIM24O15164 1050 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 PPFIA4O75335 1185 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 SCAF4O95104 1147 aaKnown RBP5.06□□□□□ -1.6
GTF3A-207ENST00000482655 CFBP00751 764 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 CNGA1P29973 690 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 INHBCP55103 352 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 APBA1Q02410 837 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 DPTQ07507 201 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 METTL24Q5JXM2 366 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 PDZD4Q76G19 769 aaPredicted RBP5.06□□□□□ -1.6
GTF3A-207ENST00000482655 DOK3Q7L591 496 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 SLC41A1Q8IVJ1 513 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 ZNF480Q8WV37 535 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 SNX33Q8WV41 574 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 BRINP2Q9C0B6 783 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 PRDM12Q9H4Q4 367 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 DPP7Q9UHL4 492 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 CLCA2Q9UQC9 943 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 CLASP1Q7Z460 1538 aa5.06□□□□□ -1.6
GTF3A-207ENST00000482655 TARBP1Q13395 1621 aaKnown RBP5.05□□□□□ -1.6
GTF3A-207ENST00000482655 B5MCH6 92 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 ITGA10O75578 1167 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 GASTP01350 101 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 VPS72Q15906 364 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 C19orf54Q5BKX5 351 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 FAM180AQ6UWF9 173 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 STRA8Q7Z7C7 330 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 OR52N2Q8NGI0 321 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 LARP4BQ92615 738 aaKnown RBP5.05□□□□□ -1.6
GTF3A-207ENST00000482655 CHFRQ96EP1 664 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 PRRX2Q99811 253 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 CPEB1Q9BZB8 566 aaKnown RBP5.05□□□□□ -1.6
GTF3A-207ENST00000482655 SPON1Q9HCB6 807 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 TRPS1Q9UHF7 1281 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 EDARQ9UNE0 448 aa5.05□□□□□ -1.6
GTF3A-207ENST00000482655 NOP58Q9Y2X3 529 aaKnown RBP5.05□□□□□ -1.6
GTF3A-207ENST00000482655 RPTORQ8N122 1335 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 TOPBP1Q92547 1522 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 GOLGA8AA7E2F4 631 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 PHF2O75151 1096 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 TMEM127O75204 238 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 MTHFD2P13995 350 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 CTSSP25774 331 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 MASP1P48740 699 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 TMPRSS15P98073 1019 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 CDK17Q00537 523 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 FAPQ12884 760 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 GJC2Q5T442 439 aaPredicted RBP5.04□□□□□ -1.6
GTF3A-207ENST00000482655 ABHD15Q6UXT9 468 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 MRGPRGQ86SM5 289 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 XYLT1Q86Y38 959 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 AUTS2Q8WXX7 1259 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 CEP89Q96ST8 783 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 MENTQ9BUN1 341 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 LSM14BQ9BX40 385 aaKnown RBP5.04□□□□□ -1.6
GTF3A-207ENST00000482655 QRSL1Q9H0R6 528 aaKnown RBP5.04□□□□□ -1.6
GTF3A-207ENST00000482655 GPRC5DQ9NZD1 345 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 GPRC5BQ9NZH0 403 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 ZBTB21Q9ULJ3 1066 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 COL4A3BPQ9Y5P4 624 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 AQRO60306 1485 aaKnown RBP eCLIP5.04□□□□□ -1.6
GTF3A-207ENST00000482655 IFT140Q96RY7 1462 aa5.04□□□□□ -1.6
GTF3A-207ENST00000482655 RSF1Q96T23 1441 aaPredicted RBP5.04□□□□□ -1.6
GTF3A-207ENST00000482655 A0A087X1B8 175 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 TMEM191CA6NGB0 347 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 MGAT1P26572 445 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 APOBEC3AP31941 199 aaPredicted RBP5.03□□□□□ -1.6
GTF3A-207ENST00000482655 SCAND1P57086 179 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 MRPS9P82933 396 aaKnown RBP5.03□□□□□ -1.6
GTF3A-207ENST00000482655 STAT4Q14765 748 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 CRB2Q5IJ48 1285 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 KCNV1Q6PIU1 500 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 AFAP1L2Q8N4X5 818 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 MDM1Q8TC05 714 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 TGFBRAP1Q8WUH2 860 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 LENG9Q96B70 501 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 DCLRE1CQ96SD1 692 aaKnown RBP5.03□□□□□ -1.6
GTF3A-207ENST00000482655 NDC1Q9BTX1 674 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 KCNH6Q9H252 994 aa5.03□□□□□ -1.6
GTF3A-207ENST00000482655 GRXCR1A8MXD5 290 aa5.02□□□□□ -1.61
GTF3A-207ENST00000482655 AKR1B10O60218 316 aa5.02□□□□□ -1.61
GTF3A-207ENST00000482655 RAMP2O60895 175 aa5.02□□□□□ -1.61
GTF3A-207ENST00000482655 ABHD16AO95870 558 aa5.02□□□□□ -1.61
GTF3A-207ENST00000482655 ITGB1P05556 798 aa5.02□□□□□ -1.61
GTF3A-207ENST00000482655 CRHR1P34998 444 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms