RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 LPPQ93052 612 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 GTPBP4Q9BZE4 634 aaKnown RBP21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 GBP3Q9H0R5 595 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 CDT1Q9H211 546 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 NXF3Q9H4D5 531 aaKnown RBP21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 CTNND2Q9UQB3 1225 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 IPPQ9Y573 584 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 PCDHB7Q9Y5E2 793 aa21.78■■□□□ 1.08
TRAPPC12-220ENST00000482645 PROZP22891 400 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 BMP8BP34820 402 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 PRCPP42785 496 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 RAB27AP51159 221 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 OSTNP61366 133 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 STIM1Q13586 685 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 NOC3LQ8WTT2 800 aaKnown RBP21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 POMGNT1Q8WZA1 660 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 HAPLN2Q9GZV7 340 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 PTPRHQ9HD43 1115 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 TTC3P53804 2025 aa21.77■■□□□ 1.08
TRAPPC12-220ENST00000482645 SKIP12755 728 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 ATP2A2P16615 1042 aaKnown RBP21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 SEZ6Q53EL9 994 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 ARMCX5Q6P1M9 558 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 FAM43BQ6ZT52 329 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 HS2ST1Q7LGA3 356 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 THNSL1Q8IYQ7 743 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 TDHQ8IZJ6 230 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 GUF1Q8N442 669 aaKnown RBP21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 CEP120Q8N960 986 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 SMG8Q8ND04 991 aaKnown RBP21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 MSTO1Q9BUK6 570 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 TRAIPQ9BWF2 469 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 NAT10Q9H0A0 1025 aaKnown RBP21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 PTPRSQ13332 1948 aa21.76■■□□□ 1.07
TRAPPC12-220ENST00000482645 MEIS3P2A8K0S8 358 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 TULP1O00294 542 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 ABLIM1O14639 778 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 CLIC2O15247 247 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 STAG3L1P0CL83 205 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 MCF2P10911 925 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 FGFR1P11362 822 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 ATF7P17544 494 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 AKAP5P24588 427 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 MCL1Q07820 350 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 SLFN12LQ6IEE8 588 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 GAS2L3Q86XJ1 694 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 NPAS4Q8IUM7 802 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 ADSSL1Q8N142 457 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 SLC9A7Q96T83 725 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 CBWD1Q9BRT8 395 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 ZBED2Q9BTP6 218 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 PCIF1Q9H4Z3 704 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 SNTG2Q9NY99 539 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 PPP1R3GB7ZBB8 358 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 TGFB1I1O43294 461 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 ITGA4P13612 1032 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 ADSSP30520 456 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 FAM189BP81408 668 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 RASIP1Q5U651 963 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 PRPF38BQ5VTL8 546 aaKnown RBP21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 HACE1Q8IYU2 909 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 TOP1MTQ969P6 601 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 PGBD4Q96DM1 585 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 RNF39Q9H2S5 420 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 KCTD10Q9H3F6 313 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 AGPAT3Q9NRZ7 376 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 TMEM161AQ9NX61 479 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 PARP2Q9UGN5 583 aa21.75■■□□□ 1.07
TRAPPC12-220ENST00000482645 A0A0B4J269 797 aa21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 PSMA7O14818 248 aa21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 ZNF165P49910 485 aa21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 PAK1Q13153 545 aa21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 RNF214Q8ND24 703 aa21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 NELFBQ8WX92 580 aa21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 SAAL1Q96ER3 474 aa21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 TYW1Q9NV66 732 aaKnown RBP21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 AGO2Q9UKV8 859 aaKnown RBP21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 COLQQ9Y215 455 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC12-220ENST00000482645 GRXCR1A8MXD5 290 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 ZNF623O75123 536 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 EOMESO95936 686 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 PPP1R2P41236 205 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 GATMP50440 423 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 CYP2J2P51589 502 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 STX17P56962 302 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 COBLL1Q53SF7 1204 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 ZBTB41Q5SVQ8 909 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 FAM109BQ6ICB4 259 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 ZNF598Q86UK7 904 aaKnown RBP21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 HERC6Q8IVU3 1022 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 TMEM192Q8IY95 271 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 FAM200AQ8TCP9 573 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 CCDC94Q9BW85 323 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 ELAC1Q9H777 363 aaKnown RBP21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 RNF216Q9NWF9 866 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 KLK14Q9P0G3 267 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 INPP5FQ9Y2H2 1132 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 STYXL1Q9Y6J8 313 aa21.73■■□□□ 1.07
TRAPPC12-220ENST00000482645 GOLGA8IPA6NC78 632 aa21.72■■□□□ 1.07
TRAPPC12-220ENST00000482645 GOLGA8JA6NMD2 632 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms