RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 TIPINQ9BVW5 301 aa9.91□□□□□ -0.82
LINC00544-202ENST00000481738 ZBP1Q9H171 429 aa9.91□□□□□ -0.82
LINC00544-202ENST00000481738 KMT5AQ9NQR1 393 aa9.91□□□□□ -0.82
LINC00544-202ENST00000481738 SNTG2Q9NY99 539 aa9.91□□□□□ -0.82
LINC00544-202ENST00000481738 CLEC1BQ9P126 229 aa9.91□□□□□ -0.82
LINC00544-202ENST00000481738 FAM50BQ9Y247 325 aa9.91□□□□□ -0.82
LINC00544-202ENST00000481738 PRG3Q9Y2Y8 225 aaPredicted RBP9.91□□□□□ -0.82
LINC00544-202ENST00000481738 TDRD15B5MCY1 1934 aaKnown RBP9.91□□□□□ -0.82
LINC00544-202ENST00000481738 PHLPP2Q6ZVD8 1323 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 NPHP3-ACAD11A0A0J9YXS1 232 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 C2orf71A6NGG8 1288 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 SLC16A4O15374 487 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 HSP90AA1P07900 732 aaKnown RBP9.9□□□□□ -0.82
LINC00544-202ENST00000481738 CTSAP10619 480 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 PLCG1P19174 1290 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 DSC1Q08554 894 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 GRIK3Q13003 919 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 SMAD4Q13485 552 aaKnown RBP9.9□□□□□ -0.82
LINC00544-202ENST00000481738 SPECC1Q5M775 1068 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 ATF7IP2Q5U623 682 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 LLGL2Q6P1M3 1020 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 GPBP1Q86WP2 473 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 FAM178BQ8IXR5 827 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 MRPL43Q8N983 215 aaKnown RBP9.9□□□□□ -0.82
LINC00544-202ENST00000481738 GSTCDQ8NEC7 633 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 LRRC15Q8TF66 581 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 USP28Q96RU2 1077 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 VN1R3Q9BXE9 311 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 ZSCAN16Q9H4T2 348 aaPredicted RBP9.9□□□□□ -0.82
LINC00544-202ENST00000481738 TMEM134Q9H6X4 195 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 C17orf75Q9HAS0 396 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 BLOC1S4Q9NUP1 217 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 MARCH5Q9NX47 278 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 ARHGAP28Q9P2N2 729 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 FBXO2Q9UK22 296 aaPredicted RBP9.9□□□□□ -0.82
LINC00544-202ENST00000481738 TNFSF13BQ9Y275 285 aa9.9□□□□□ -0.82
LINC00544-202ENST00000481738 MYH11P35749 1972 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 FSD2A1L4K1 749 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 CLASP2O75122 1294 aaKnown RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 NR1I2O75469 434 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 RECQL4O94761 1208 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 SRGAP2BP0DMP2 458 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 PLS3P13797 630 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 SSTR3P32745 418 aaPredicted RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 COASYQ13057 564 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 KCNC3Q14003 757 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 MCM6Q14566 821 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 DCAF4L1Q3SXM0 396 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 ARSHQ5FYA8 562 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 FOXD4L5Q5VV16 416 aaPredicted RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 USP49Q70CQ1 688 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 TAS1R3Q7RTX0 852 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 TMEM87AQ8NBN3 555 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 SPRYD3Q8NCJ5 442 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 SPIRE2Q8WWL2 714 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 FOXD4L4Q8WXT5 416 aaPredicted RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 RAD54LQ92698 747 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 EPSTI1Q96J88 318 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 CLIC6Q96NY7 704 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 ACO2Q99798 780 aaKnown RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 TARS2Q9BW92 718 aaKnown RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 COLEC11Q9BWP8 271 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 MRPL4Q9BYD3 311 aaKnown RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 CCSER1Q9C0I3 900 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 CXCL16Q9H2A7 254 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 CD320Q9NPF0 282 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 KCND2Q9NZV8 630 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 GDAQ9Y2T3 454 aa9.89□□□□□ -0.83
LINC00544-202ENST00000481738 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 SRPRBQ9Y5M8 271 aaKnown RBP9.89□□□□□ -0.83
LINC00544-202ENST00000481738 ZMYM2Q9UBW7 1377 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 F8W810 466 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 PTGESO14684 152 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 FAM13AO94988 1023 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 KRT18P05783 430 aaKnown RBP9.88□□□□□ -0.83
LINC00544-202ENST00000481738 SMTNP53814 917 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 STRN3Q13033 797 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 GIT2Q14161 759 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 SLC39A14Q15043 492 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 PTPN14Q15678 1187 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 SMAD2Q15796 467 aaKnown RBP9.88□□□□□ -0.83
LINC00544-202ENST00000481738 ZNF568Q3ZCX4 644 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 ANKRD54Q6NXT1 300 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 TMEM184AQ6ZMB5 413 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 APBB1IPQ7Z5R6 666 aaPredicted RBP9.88□□□□□ -0.83
LINC00544-202ENST00000481738 ZBTB33Q86T24 672 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 GJD3Q8N144 294 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 CEP120Q8N960 986 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 SMRP1Q8NCR6 262 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 LARP4BQ92615 738 aaKnown RBP9.88□□□□□ -0.83
LINC00544-202ENST00000481738 RABGGTAQ92696 567 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 CASP10Q92851 521 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 REEP2Q9BRK0 252 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 NTPCRQ9BSD7 190 aaKnown RBP9.88□□□□□ -0.83
LINC00544-202ENST00000481738 TCHPQ9BT92 498 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 HERC2P3Q9BVR0 1158 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 APOL5Q9BWW9 433 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 CDT1Q9H211 546 aa9.88□□□□□ -0.83
LINC00544-202ENST00000481738 LARSQ9P2J5 1176 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms