RNA–Protein interactions for RNA: ENST00000481639.1

PHC3-208, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-208ENST00000481639 RRP12Q5JTH9 1297 aaKnown RBP6.78□□□□□ -1.32
PHC3-208ENST00000481639 C16orf86Q6ZW13 317 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 CERS3Q8IU89 383 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 ENAHQ8N8S7 591 aaPredicted RBP6.78□□□□□ -1.32
PHC3-208ENST00000481639 LINC01356Q8N9X3 169 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 TEKT1Q969V4 418 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 ZBED3Q96IU2 234 aaPredicted RBP6.78□□□□□ -1.32
PHC3-208ENST00000481639 SHDQ96IW2 340 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 LLPHQ9BRT6 129 aaKnown RBP6.78□□□□□ -1.32
PHC3-208ENST00000481639 MTA3Q9BTC8 594 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 MYL10Q9BUA6 226 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 TMX4Q9H1E5 349 aaPredicted RBP6.78□□□□□ -1.32
PHC3-208ENST00000481639 RNF41Q9H4P4 317 aaPredicted RBP6.78□□□□□ -1.32
PHC3-208ENST00000481639 IL17RBQ9NRM6 502 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 RTEL1Q9NZ71 1219 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 PLA2G2DQ9UNK4 145 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 SMC3Q9UQE7 1217 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 PLIN4Q96Q06 1357 aa6.78□□□□□ -1.32
PHC3-208ENST00000481639 BAZ2BQ9UIF8 2168 aaKnown RBP6.78□□□□□ -1.32
PHC3-208ENST00000481639 SHTN1A0MZ66 631 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 UBE2Q2LH0YL09 131 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 STXBP3O00186 592 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 IFIT3O14879 490 aaKnown RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 FOXD2O60548 495 aaPredicted RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 PPM1BO75688 479 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 GLI4P10075 376 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 PCP11498 1178 aaKnown RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 NOVP48745 357 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 CACNB3P54284 484 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 PRR5P85299 388 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 CAP1Q01518 475 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 CXCL9Q07325 125 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 TARBP2Q15633 366 aaKnown RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 FAM47AQ5JRC9 791 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 SOGA3Q5TF21 947 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 C9orf131Q5VYM1 1079 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 ADAT2Q7Z6V5 191 aaKnown RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 ARHGEF39Q8N4T4 335 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 TP53I13Q8NBR0 393 aaPredicted RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 ESR2Q92731 530 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 RCC1LQ96I51 464 aaKnown RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 FGD4Q96M96 766 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 OSBPL5Q9H0X9 879 aaPredicted RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 VPS33BQ9H267 617 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 TAOK3Q9H2K8 898 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 DNAJC18Q9H819 358 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 USP40Q9NVE5 1235 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 CGGBP1Q9UFW8 167 aaPredicted RBP6.77□□□□□ -1.33
PHC3-208ENST00000481639 CNTNAP1P78357 1384 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 ATRNL1Q5VV63 1379 aa6.77□□□□□ -1.33
PHC3-208ENST00000481639 WDR33Q9C0J8 1336 aaKnown RBP6.76□□□□□ -1.33
PHC3-208ENST00000481639 ATAD5Q96QE3 1844 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 IGKV6D-41A0A0C4DH26 115 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 ZC3H12DA2A288 527 aaKnown RBP6.76□□□□□ -1.33
PHC3-208ENST00000481639 SHMT1P34896 483 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 LIMS1P48059 325 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 NASPP49321 788 aaPredicted RBP6.76□□□□□ -1.33
PHC3-208ENST00000481639 RCAN1P53805 252 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 TROAPQ12815 778 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 FSTL1Q12841 308 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 RESTQ13127 1097 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 SHROOM1Q2M3G4 852 aaPredicted RBP6.76□□□□□ -1.33
PHC3-208ENST00000481639 SLC35G1Q2M3R5 365 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 CFAP100Q494V2 611 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 RASGRP2Q7LDG7 609 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 MICU3Q86XE3 530 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 FEZF2Q8TBJ5 459 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 ANKS1AQ92625 1134 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 MRRFQ96E11 262 aaKnown RBP6.76□□□□□ -1.33
PHC3-208ENST00000481639 DDX11Q96FC9 970 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 PRMT6Q96LA8 375 aaPredicted RBP6.76□□□□□ -1.33
PHC3-208ENST00000481639 AIFM3Q96NN9 605 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 NOL10Q9BSC4 688 aaKnown RBP6.76□□□□□ -1.33
PHC3-208ENST00000481639 IDI2Q9BXS1 227 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 LUC7LQ9NQ29 371 aaKnown RBP6.76□□□□□ -1.33
PHC3-208ENST00000481639 GJB4Q9NTQ9 266 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 LMBRD1Q9NUN5 540 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 SUSD2Q9UGT4 822 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 BACE2Q9Y5Z0 518 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 ZNF541Q9H0D2 1346 aa6.76□□□□□ -1.33
PHC3-208ENST00000481639 PAPPA2Q9BXP8 1791 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 C2orf71A6NGG8 1288 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 DDTLA6NHG4 134 aaPredicted RBP6.75□□□□□ -1.33
PHC3-208ENST00000481639 GOLGA8AA7E2F4 631 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 FZD9O00144 591 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 FFAR3O14843 346 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 ZBTB43O43298 467 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 ATF2P15336 505 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 METAP2P50579 478 aaKnown RBP eCLIP6.75□□□□□ -1.33
PHC3-208ENST00000481639 GRB10Q13322 594 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 PICALMQ13492 652 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 WTAPQ15007 396 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 PPP2R5EQ16537 467 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 DPY19L1Q2PZI1 675 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 LARP1BQ659C4 914 aaKnown RBP6.75□□□□□ -1.33
PHC3-208ENST00000481639 NIM1KQ8IY84 436 aa6.75□□□□□ -1.33
PHC3-208ENST00000481639 PHKBQ93100 1093 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms