RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 PHF2O75151 1096 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 CYP1A1P04798 512 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-207ENST00000481131 HTR1BP28222 390 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 ECHS1P30084 290 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 ADAM8P78325 824 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 VMACQ2NL98 169 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 COBLL1Q53SF7 1204 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 FAM26FQ5R3K3 315 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 ZNF761Q86XN6 746 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-207ENST00000481131 COL23A1Q86Y22 540 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-207ENST00000481131 FAM43AQ8N2R8 423 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 KLHL36Q8N4N3 616 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 ZGPATQ8N5A5 531 aaKnown RBP6.62□□□□□ -1.35
UPF3A-207ENST00000481131 ZNF480Q8WV37 535 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 PMM1Q92871 262 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 SLC7A6OSQ96CW6 309 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-207ENST00000481131 PPP1R16BQ96T49 567 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 OR10A2Q9H208 303 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 C14orf93Q9H972 538 aaKnown RBP6.62□□□□□ -1.35
UPF3A-207ENST00000481131 FAM50BQ9Y247 325 aa6.62□□□□□ -1.35
UPF3A-207ENST00000481131 SMARCA2P51531 1590 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 PEG3Q9GZU2 1588 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 NPIPB6E9PJ23 425 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 RFXAPO00287 272 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 SGTAO43765 313 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 PLIN1O60240 522 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 TOX4O94842 621 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 ENDOD1O94919 500 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 ZBED1O96006 694 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 HRGP04196 525 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 AMY1AP04745 511 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 SREBF1P36956 1147 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 KIR2DL3P43628 341 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 AFF3P51826 1226 aaKnown RBP6.61□□□□□ -1.35
UPF3A-207ENST00000481131 ATP2C1P98194 919 aaPredicted RBP6.61□□□□□ -1.35
UPF3A-207ENST00000481131 HGFACQ04756 655 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 ZNF385BQ569K4 471 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 PPP4R4Q6NUP7 873 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 SWSAP1Q6NVH7 229 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 FAM180AQ6UWF9 173 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 KIAA0319LQ8IZA0 1049 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 FAM156AQ8NDB6 213 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 OR7D4Q8NG98 312 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 PLBD2Q8NHP8 589 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 GCDHQ92947 438 aaPredicted RBP6.61□□□□□ -1.35
UPF3A-207ENST00000481131 RGMAQ96B86 450 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 MRGPRX4Q96LA9 322 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 KRTAP4-2Q9BYR5 136 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 LDAHQ9H6V9 325 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 BCO1Q9HAY6 547 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 BARX1Q9HBU1 254 aaPredicted RBP6.61□□□□□ -1.35
UPF3A-207ENST00000481131 GPRC5DQ9NZD1 345 aa6.61□□□□□ -1.35
UPF3A-207ENST00000481131 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 FAM227AF5H4B4 570 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 FTLP02792 175 aaPredicted RBP6.6□□□□□ -1.35
UPF3A-207ENST00000481131 SYN1P17600 705 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 ADCY7P51828 1080 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 AGFG1P52594 562 aaKnown RBP6.6□□□□□ -1.35
UPF3A-207ENST00000481131 WNT3AP56704 352 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 CDC42EP1Q00587 391 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 KCNA10Q16322 511 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 IL31Q6EBC2 164 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 NPNTQ6UXI9 565 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 USP30Q70CQ3 517 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 SRGAP1Q7Z6B7 1085 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 TTC7BQ86TV6 843 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 DRC7Q8IY82 874 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 LRRC56Q8IYG6 542 aaPredicted RBP6.6□□□□□ -1.35
UPF3A-207ENST00000481131 TRMT2AQ8IZ69 625 aaKnown RBP6.6□□□□□ -1.35
UPF3A-207ENST00000481131 PQLC1Q8N2U9 271 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 LINC01356Q8N9X3 169 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 REPS2Q8NFH8 660 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 FBXO18Q8NFZ0 1043 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 OR14K1Q8NGZ2 314 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 SVIPQ8NHG7 77 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 TTC17Q96AE7 1141 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 CLPTM1LQ96KA5 538 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 SAMD11Q96NU1 681 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 FAM204AQ9H8W3 233 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 TDP1Q9NUW8 608 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 STXBP5LQ9Y2K9 1186 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 ZDHHC9Q9Y397 364 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 NR2E3Q9Y5X4 410 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 HMGXB3Q12766 1538 aa6.6□□□□□ -1.35
UPF3A-207ENST00000481131 MTSS1O43312 755 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 ITGA10O75578 1167 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 NEK3P51956 506 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 BPIFB4P59827 614 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 ATP8B2P98198 1209 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 NOGQ13253 232 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 RNF151Q2KHN1 245 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 GJC2Q5T442 439 aaPredicted RBP6.59□□□□□ -1.35
UPF3A-207ENST00000481131 PPP4R3AQ6IN85 833 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 KLHDC4Q8TBB5 520 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 IFI44Q8TCB0 444 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 CCHCR1Q8TD31 782 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 CFHR4Q92496 578 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 LPPQ93052 612 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms