RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 ABLIM1O14639 778 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 MCF2P10911 925 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 DARSP14868 501 aaKnown RBP16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 AXLP30530 894 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 CRYBB1P53674 252 aaPredicted RBP16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 KCNMA1Q12791 1236 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 CETN1Q12798 172 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 ITGA7Q13683 1181 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 PSMD6Q15008 389 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 SURF1Q15526 300 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 EXOC3L4Q17RC7 722 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 KIZQ2M2Z5 673 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 ZNF568Q3ZCX4 644 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 GDF6Q6KF10 455 aaPredicted RBP16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 SERINC5Q86VE9 423 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 ZSWIM2Q8NEG5 633 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 ZNF397Q8NF99 534 aaPredicted RBP16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 PPP1R13LQ8WUF5 828 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 PPP1R16BQ96T49 567 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 TTYH3Q9C0H2 523 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 HAPLN2Q9GZV7 340 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 KCNF1Q9H3M0 494 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 PLCB1Q9NQ66 1216 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 LUC7L2Q9Y383 392 aaKnown RBP16.09■□□□□ 0.17
SNRNP200-205ENST00000480835 TTLL13PA6NNM8 815 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 TSPAN1O60635 241 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 TRIM49P0CI25 452 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 TRIM49CP0CI26 452 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 EIF4BP23588 611 aaKnown RBP16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 CASP14P31944 242 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 ZBED6P86452 979 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 MYL7Q01449 175 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 ARID5BQ14865 1188 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 CRELD2Q6UXH1 353 aaPredicted RBP16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 CTU1Q7Z7A3 348 aaKnown RBP16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 ZSCAN30Q86W11 494 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 BRSK2Q8IWQ3 736 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 CPLX3Q8WVH0 158 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 ADPGKQ9BRR6 497 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 LSM14BQ9BX40 385 aaKnown RBP16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 CELF4Q9BZC1 486 aaKnown RBP16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 UNC93B1Q9H1C4 597 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 PAK6Q9NQU5 681 aaPredicted RBP16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 USP20Q9Y2K6 914 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 TRPV2Q9Y5S1 764 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 GRIN2DO15399 1336 aa16.08■□□□□ 0.16
SNRNP200-205ENST00000480835 TTC26A0AVF1 554 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 B4GALT5O43286 388 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 FAM189A1O60320 539 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 IQCF3P0C7M6 154 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 ARF4P18085 180 aaPredicted RBP16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 KRT9P35527 623 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 KLK7P49862 253 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 FXR1P51114 621 aaKnown RBP eCLIP16.07■□□□□ 0.164e-7■■■□□ 18
SNRNP200-205ENST00000480835 ADKP55263 362 aaKnown RBP16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 CLDN10P78369 228 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 MRPS6P82932 125 aaKnown RBP16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 CCZ1BP86790 482 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 CCZ1P86791 482 aaPredicted RBP16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 PTK7Q13308 1070 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 SNX17Q15036 470 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 TSR1Q2NL82 804 aaKnown RBP16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 DCAF4L1Q3SXM0 396 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 C1orf220Q5T0J3 134 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 CATSPER4Q7RTX7 472 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 ZBTB33Q86T24 672 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 CCDC155Q8N6L0 562 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 OR8K1Q8NGG5 319 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 PLEKHO2Q8TD55 490 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 ZNF830Q96NB3 372 aaPredicted RBP16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 FNBP1Q96RU3 617 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 OSMRQ99650 979 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 NAA15Q9BXJ9 866 aaKnown RBP16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 NUCKS1Q9H1E3 243 aaKnown RBP16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 CDT1Q9H211 546 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 TMX1Q9H3N1 280 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 PDZD7Q9H5P4 517 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 RBAKQ9NYW8 714 aaPredicted RBP16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 GCNT4Q9P109 453 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 CEP72Q9P209 647 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 FBXL5Q9UKA1 691 aa16.07■□□□□ 0.16
SNRNP200-205ENST00000480835 A0A0U1RQG5 324 aaPredicted RBP16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 A0A1B0GUA9 196 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 A0A1W2PQ45 241 aaPredicted RBP16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 A0A1W2PQY0 241 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 LRRIQ3A6PVS8 624 aaPredicted RBP16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 DNM1LO00429 736 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 CAND2O75155 1236 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 HSPA8P11142 646 aaKnown RBP16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 HARSP12081 509 aaKnown RBP16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 FECHP22830 423 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 PON1P27169 355 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 ACOT2P49753 483 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 MXI1P50539 228 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 AP3M2P53677 418 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 DLG4P78352 724 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 TMEM62Q0P6H9 643 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 PKN2Q16513 984 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 257.5 ms