RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.72□□□□□ -0.21
SIK3-209ENST00000480222 SQORQ9Y6N5 450 aa13.72□□□□□ -0.21
SIK3-209ENST00000480222 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
SIK3-209ENST00000480222 ITIH6Q6UXX5 1313 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 A0A1W2PQC6 194 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 GOLGA6L6A8MZA4 724 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 OGTO15294 1046 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 TLR3O15455 904 aaKnown RBP13.71□□□□□ -0.21
SIK3-209ENST00000480222 B4GALT5O43286 388 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 B4GALT4O60513 344 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 COL6A1P12109 1028 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.21
SIK3-209ENST00000480222 THPOP40225 353 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 MATR3P43243 847 aaKnown RBP eCLIP13.71□□□□□ -0.21
SIK3-209ENST00000480222 POU5F1Q01860 360 aaKnown RBP13.71□□□□□ -0.21
SIK3-209ENST00000480222 NR1I3Q14994 352 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 TRIM71Q2Q1W2 868 aaKnown RBP13.71□□□□□ -0.21
SIK3-209ENST00000480222 MIIPQ5JXC2 388 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 PRPF38BQ5VTL8 546 aaKnown RBP13.71□□□□□ -0.21
SIK3-209ENST00000480222 NOTUMQ6P988 496 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 FAM43BQ6ZT52 329 aaPredicted RBP13.71□□□□□ -0.21
SIK3-209ENST00000480222 FAM126BQ8IXS8 530 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 DHX38Q92620 1227 aaKnown RBP13.71□□□□□ -0.21
SIK3-209ENST00000480222 WNT8BQ93098 351 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 SAAL1Q96ER3 474 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 NAP1L5Q96NT1 182 aaPredicted RBP13.71□□□□□ -0.21
SIK3-209ENST00000480222 ADPGKQ9BRR6 497 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 TCHPQ9BT92 498 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 NDST4Q9H3R1 872 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 PCIF1Q9H4Z3 704 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.21
SIK3-209ENST00000480222 A0A1B0GUA9 196 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 ZNF233A6NK53 670 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 TTLL13PA6NNM8 815 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 STX10O60499 249 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
SIK3-209ENST00000480222 AFPP02771 609 aaKnown RBP13.7□□□□□ -0.22
SIK3-209ENST00000480222 CTSHP09668 335 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
SIK3-209ENST00000480222 BFSP2Q13515 415 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 DCAF17Q5H9S7 520 aaPredicted RBP13.7□□□□□ -0.22
SIK3-209ENST00000480222 ANKRD33Q7Z3H0 272 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 CBWD2Q8IUF1 395 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 VSTM4Q8IW00 320 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 USP38Q8NB14 1042 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 TMEM40Q8WWA1 233 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 SLC35C1Q96A29 364 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 FAM213AQ9BRX8 229 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 CDT1Q9H211 546 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 VPS16Q9H269 839 aa13.7□□□□□ -0.22
SIK3-209ENST00000480222 GTPBP10A4D1E9 387 aaKnown RBP13.69□□□□□ -0.22
SIK3-209ENST00000480222 PES1O00541 588 aaKnown RBP13.69□□□□□ -0.22
SIK3-209ENST00000480222 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 FAM189A1O60320 539 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 CSDE1O75534 798 aaKnown RBP13.69□□□□□ -0.22
SIK3-209ENST00000480222 RPS6KA5O75582 802 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 CD4P01730 458 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 ADRB2P07550 413 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 PBX1P40424 430 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 VAMP7P51809 220 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 UBXN1Q04323 297 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 CYP24A1Q07973 514 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 TCERG1LQ5VWI1 586 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 EEF1DP3Q658K8 133 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 SPECC1LQ69YQ0 1117 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 SLC27A1Q6PCB7 646 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 FAM228AQ86W67 206 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 BRSK2Q8IWQ3 736 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 IQCDQ96DY2 449 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 ZBTB45Q96K62 511 aaPredicted RBP13.69□□□□□ -0.22
SIK3-209ENST00000480222 TOX2Q96NM4 488 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 ERGIC2Q96RQ1 377 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 HAPLN2Q9GZV7 340 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 TRPV6Q9H1D0 765 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 RBAKQ9NYW8 714 aaPredicted RBP13.69□□□□□ -0.22
SIK3-209ENST00000480222 IMPACTQ9P2X3 320 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 USP20Q9Y2K6 914 aa13.69□□□□□ -0.22
SIK3-209ENST00000480222 GOLGA8IPA6NC78 632 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 GOLGA8JA6NMD2 632 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 GPR182O15218 404 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 PMM2O15305 246 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 P4HA2O15460 535 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 CHRNA1P02708 482 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 HARSP12081 509 aaKnown RBP13.68□□□□□ -0.22
SIK3-209ENST00000480222 CKBP12277 381 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 GTF2H1P32780 548 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 TRIM14Q14142 442 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 PSMD6Q15008 389 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 SURF1Q15526 300 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 FBXO47Q5MNV8 452 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 ZBTB33Q86T24 672 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 DRC7Q8IY82 874 aa13.68□□□□□ -0.22
SIK3-209ENST00000480222 CPB2Q96IY4 423 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms