RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 MCL1Q07820 350 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 CLLU1OSQ5K130 101 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 AGMOQ6ZNB7 445 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 ABI1Q8IZP0 508 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 RNF169Q8NCN4 708 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 SPATA20Q8TB22 786 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 ZNF507Q8TCN5 953 aa21.62■■□□□ 1.05
LIME1-205ENST00000480139 NXF3Q9H4D5 531 aaKnown RBP21.62■■□□□ 1.05
LIME1-205ENST00000480139 NLRC5Q86WI3 1866 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 LCHNA4D1U4 455 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 CLDN3O15551 220 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 PNOCQ13519 176 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 BTG3Q14201 252 aaPredicted RBP21.61■■□□□ 1.05
LIME1-205ENST00000480139 NOLC1Q14978 699 aaKnown RBP eCLIP21.61■■□□□ 1.05
LIME1-205ENST00000480139 BMT2Q1RMZ1 405 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 GLB1LQ6UWU2 654 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 LPPQ93052 612 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 LRCH3Q96II8 777 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 CASD1Q96PB1 797 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 GSDMAQ96QA5 445 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 TCHPQ9BT92 498 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 MRPL9Q9BYD2 267 aaKnown RBP21.61■■□□□ 1.05
LIME1-205ENST00000480139 NKX2-4Q9H2Z4 354 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 RSAD1Q9HA92 442 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 SLC28A3Q9HAS3 691 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 GIT1Q9Y2X7 761 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 STYXL1Q9Y6J8 313 aa21.61■■□□□ 1.05
LIME1-205ENST00000480139 KIAA1671Q9BY89 1806 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 LINC01553A4QN01 128 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 MEIS3P2A8K0S8 358 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 SMC2O95347 1197 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 GRM5P41594 1212 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 FXR1P51114 621 aaKnown RBP eCLIP21.6■■□□□ 1.05
LIME1-205ENST00000480139 TAP1Q03518 808 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 KCNA1Q09470 495 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 PPP2R2DQ66LE6 453 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 SLFN12LQ6IEE8 588 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 SLC39A4Q6P5W5 647 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 FIBCD1Q8N539 461 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 GLIS3Q8NEA6 775 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 HELQQ8TDG4 1101 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 ZBTB45Q96K62 511 aaPredicted RBP21.6■■□□□ 1.05
LIME1-205ENST00000480139 RMND1Q9NWS8 449 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 ANKFY1Q9P2R3 1169 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 HES2Q9Y543 173 aa21.6■■□□□ 1.05
LIME1-205ENST00000480139 TBKBP1A7MCY6 615 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 OFD1O75665 1012 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 PRPF6O94906 941 aaKnown RBP21.59■■□□□ 1.05
LIME1-205ENST00000480139 GATMP50440 423 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 STK4Q13043 487 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 KYAT1Q16773 422 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 LRRC43Q8N309 656 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 KIAA0895Q8NCT3 520 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 SCFD1Q8WVM8 642 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 CLP1Q92989 425 aaKnown RBP21.59■■□□□ 1.05
LIME1-205ENST00000480139 RNF39Q9H2S5 420 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 SLC39A2Q9NP94 309 aa21.59■■□□□ 1.05
LIME1-205ENST00000480139 A0A0B4J269 797 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 NOMO2Q5JPE7 1267 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 ZBTB33Q86T24 672 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 SYCP3Q8IZU3 236 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 SMARCE1Q969G3 411 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 SAMD11Q96NU1 681 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 CCDC94Q9BW85 323 aaPredicted RBP21.58■■□□□ 1.05
LIME1-205ENST00000480139 GTPBP4Q9BZE4 634 aaKnown RBP21.58■■□□□ 1.05
LIME1-205ENST00000480139 HAPLN2Q9GZV7 340 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 SNTG2Q9NY99 539 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 KANSL3Q9P2N6 904 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 RWDD3Q9Y3V2 267 aa21.58■■□□□ 1.05
LIME1-205ENST00000480139 TDRD15B5MCY1 1934 aaKnown RBP21.57■■□□□ 1.04
LIME1-205ENST00000480139 CITO14578 2027 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 ANKRD63C9JTQ0 380 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 FAM189A1O60320 539 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 ARHGEF15O94989 841 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 LINC00271P0C7V0 271 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 HOXD13P35453 343 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 SNRPFP62306 86 aaKnown RBP21.57■■□□□ 1.04
LIME1-205ENST00000480139 PAN2Q504Q3 1202 aaKnown RBP21.57■■□□□ 1.04
LIME1-205ENST00000480139 URGCPQ8TCY9 931 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 TGS1Q96RS0 853 aaKnown RBP21.57■■□□□ 1.04
LIME1-205ENST00000480139 APOL6Q9BWW8 343 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 PCDHA5Q9Y5H7 936 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 MRPL42Q9Y6G3 142 aaKnown RBP21.57■■□□□ 1.04
LIME1-205ENST00000480139 CHD9Q3L8U1 2897 aa21.57■■□□□ 1.04
LIME1-205ENST00000480139 ARL5CA6NH57 179 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 OGTO15294 1046 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 RECQL4O94761 1208 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 KIF20AO95235 890 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 GARTP22102 1010 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 AKAP5P24588 427 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 MLH1P40692 756 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 MATR3P43243 847 aaKnown RBP eCLIP21.56■■□□□ 1.04
LIME1-205ENST00000480139 ERVK-21P61565 698 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 ZNF697Q5TEC3 545 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 CEP120Q8N960 986 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 MSTO1Q9BUK6 570 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 GBP3Q9H0R5 595 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 ZNF576Q9H609 170 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 TOPORSQ9NS56 1045 aaPredicted RBP21.56■■□□□ 1.04
LIME1-205ENST00000480139 CGNQ9P2M7 1197 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms