RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 RNF168Q8IYW5 571 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 MAML2Q8IZL2 1156 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 SUMF1Q8NBK3 374 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 RUBCNQ92622 972 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 NXPE3Q969Y0 559 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 ZNF707Q96C28 371 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 C8orf76Q96K31 380 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 RPS6KC1Q96S38 1066 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 TMEM175Q9BSA9 504 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 HERC2P3Q9BVR0 1158 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 RSAD1Q9HA92 442 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 UPF2Q9HAU5 1272 aaKnown RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 IFT122Q9HBG6 1241 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 AGPAT5Q9NUQ2 364 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 RGL1Q9NZL6 768 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 NOL7Q9UMY1 257 aaKnown RBP7.87□□□□□ -1.15
COL17A1-205ENST00000480127 FAN1Q9Y2M0 1017 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 SIT1Q9Y3P8 196 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 KIF3AQ9Y496 699 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 PPME1Q9Y570 386 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 PCDHB2Q9Y5E7 798 aa7.87□□□□□ -1.15
COL17A1-205ENST00000480127 ARHGEF35A5YM69 484 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 ANHXE9PGG2 379 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 EML1O00423 815 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 ASAP2O43150 1006 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 USO1O60763 962 aaKnown RBP7.86□□□□□ -1.15
COL17A1-205ENST00000480127 LRRN2O75325 713 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 KRT37O76014 449 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 GLUD1P00367 558 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 POMCP01189 267 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 ADH1AP07327 375 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 MYBP10242 640 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 LAMP2P13473 410 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 OR1G1P47890 313 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 GUCY1B3Q02153 619 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 NR5A1Q13285 461 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 UBXN11Q5T124 520 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 NOTUMQ6P988 496 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 ZC3H14Q6PJT7 736 aaKnown RBP7.86□□□□□ -1.15
COL17A1-205ENST00000480127 B3GNT9Q6UX72 402 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 ANO5Q75V66 913 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 CCDC83Q8IWF9 413 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 ZBTB8OSQ8IWT0 167 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 COLGALT2Q8IYK4 626 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 OXER1Q8TDS5 423 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 SMG7Q92540 1137 aaKnown RBP7.86□□□□□ -1.15
COL17A1-205ENST00000480127 STAMQ92783 540 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 GTF3C6Q969F1 213 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 CNTNAP3BQ96NU0 1288 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 EIF2AK1Q9BQI3 630 aaKnown RBP7.86□□□□□ -1.15
COL17A1-205ENST00000480127 CNTNAP3Q9BZ76 1288 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 FOXQ1Q9C009 403 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 TTC12Q9H892 705 aaPredicted RBP7.86□□□□□ -1.15
COL17A1-205ENST00000480127 RXFP1Q9HBX9 757 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 UBN1Q9NPG3 1134 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 ARHGEF3Q9NR81 526 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 SLC2A4RGQ9NR83 387 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 GJB4Q9NTQ9 266 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 KANSL3Q9P2N6 904 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 PARP2Q9UGN5 583 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 PRG3Q9Y2Y8 225 aaPredicted RBP7.86□□□□□ -1.15
COL17A1-205ENST00000480127 WDR81Q562E7 1941 aa7.86□□□□□ -1.15
COL17A1-205ENST00000480127 CNTNAP2Q9UHC6 1331 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 BTBD18B2RXH4 712 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 F8W810 466 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 DGAT1O75907 488 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 SPATA31D3P0C874 917 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 HOXA11P31270 313 aaPredicted RBP7.85□□□□□ -1.15
COL17A1-205ENST00000480127 GLUD2P49448 558 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 STARD6P59095 220 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 DSG1Q02413 1049 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 HTR4Q13639 388 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 ZRSR1Q15695 479 aaKnown RBP7.85□□□□□ -1.15
COL17A1-205ENST00000480127 RSPO4Q2I0M5 234 aaPredicted RBP7.85□□□□□ -1.15
COL17A1-205ENST00000480127 MCTP1Q6DN14 999 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 LILRA6Q6PI73 481 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 DCLRE1AQ6PJP8 1040 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 SPATA31D4Q6ZUB0 917 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 APBB1IPQ7Z5R6 666 aaPredicted RBP7.85□□□□□ -1.15
COL17A1-205ENST00000480127 C4orf19Q8IY42 314 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 SMG8Q8ND04 991 aaKnown RBP7.85□□□□□ -1.15
COL17A1-205ENST00000480127 CNNM3Q8NE01 707 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 ST13P5Q8NFI4 369 aaPredicted RBP7.85□□□□□ -1.15
COL17A1-205ENST00000480127 PJA1Q8NG27 643 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 PIGOQ8TEQ8 1089 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 HDAC7Q8WUI4 952 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 CPB2Q96IY4 423 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 IFT74Q96LB3 600 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 HINFPQ9BQA5 517 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 ADPGKQ9BRR6 497 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 RPP25Q9BUL9 199 aaKnown RBP7.85□□□□□ -1.15
COL17A1-205ENST00000480127 RAB34Q9BZG1 259 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 NT5C3AQ9H0P0 336 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 POLR3FQ9H1D9 316 aaPredicted RBP7.85□□□□□ -1.15
COL17A1-205ENST00000480127 MINDY3Q9H8M7 445 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 PIDD1Q9HB75 910 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 KCNMB3Q9NPA1 279 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 CHST7Q9NS84 486 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 DPP7Q9UHL4 492 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 VAV3Q9UKW4 847 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms