RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 NSL1Q96IY1 281 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 STK32BQ9NY57 414 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 SLC9A2Q9UBY0 812 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 SUFUQ9UMX1 484 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 UTYO14607 1347 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 INO80B-WBP1J3KQ70 363 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 DGAT1O75907 488 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 GYPCP04921 128 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CIITAP33076 1130 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 SPRP35270 261 aaPredicted RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CDK8P49336 464 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 VAMP7P51809 220 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 EPHB1P54762 984 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 NLRP11P59045 1033 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 MAPK6Q16659 721 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 METTL23Q86XA0 190 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 PPM1NQ8N819 430 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 SCFD2Q8WU76 684 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 CENPTQ96BT3 561 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 ERP27Q96DN0 273 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 OSBPL8Q9BZF1 889 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 INTS2Q9H0H0 1204 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 RSAD1Q9HA92 442 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 OLFML3Q9NRN5 406 aa6.51□□□□□ -1.37
PRPF4B-205ENST00000480058 ESYT3A0FGR9 886 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 SYCE1LA8MT33 242 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 IGF2BP3O00425 579 aaKnown RBP eCLIP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF197O14709 1029 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TOMM70O94826 608 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TMCC1O94876 653 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 KRT8P05787 483 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CNTFP26441 200 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 KCNQ4P56696 695 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 BIRC2Q13490 618 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CNGA3Q16281 694 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 HEATR6Q6AI08 1181 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 LRRC47Q8N1G4 583 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 SCFD1Q8WVM8 642 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 NAF1Q96HR8 494 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TSSK1BQ9BXA7 367 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 VCPKMTQ9H867 229 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 NGRNQ9NPE2 291 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 A1CFQ9NQ94 594 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 APEX2Q9UBZ4 518 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 SOX13Q9UN79 622 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 COPG1Q9Y678 874 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 GSG1L2A8MUP6 293 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CFLARO15519 480 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 LPXNO60711 386 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 MCAMP43121 646 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TMED10P49755 219 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 PDIA2Q13087 525 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TRIM60Q495X7 471 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 IRGCQ6NXR0 463 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 PALB2Q86YC2 1186 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 NOA1Q8NC60 698 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF483Q8TF39 744 aaPredicted RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 ZIM3Q96PE6 472 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 PRDM16Q9HAZ2 1276 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 ZBTB1Q9Y2K1 713 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CCDC78A2IDD5 438 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 MAP2K7O14733 419 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 RIMBP2O15034 1052 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 EIF2S1P05198 315 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 FXR2P51116 673 aaKnown RBP eCLIP6.5□□□□□ -1.378e-7■■□□□ 12.2
PRPF4B-205ENST00000480058 DRG2P55039 364 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 SUPT20HL1Q3ZLR7 823 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CENPPQ6IPU0 288 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 MAEAQ7L5Y9 396 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CDR2LQ86X02 465 aaPredicted RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 EEF2KMTQ96G04 330 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 SUGCTQ9HAC7 445 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 SLAIN2Q9P270 581 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 KIAA1257Q9ULG3 409 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 SAC3D1A6NKF1 404 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TRIM66O15016 1216 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 ADCY3O60266 1144 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 C4BPBP20851 252 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 KCNA3P22001 575 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CDC25AP30304 524 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TRPC1P48995 793 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 GOLGA8FQ08AF8 430 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 GOLGA8DPQ0D2H9 430 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TBC1D10CQ8IV04 446 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CD302Q8IX05 232 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CMTR1Q8N1G2 835 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF710Q8N1W2 664 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 RASGRP4Q8TDF6 673 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TEKT4Q8WW24 435 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 PSPC1Q8WXF1 523 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 CCDC126Q96EE4 140 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF518BQ9C0D4 1074 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 HERC5Q9UII4 1024 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TMEM120BA0PK00 339 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 ZBTB24O43167 697 aaPredicted RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF18P17022 549 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 PRKAA2P54646 552 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 TFAMQ00059 246 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 GRIN1Q05586 938 aa6.5□□□□□ -1.37
PRPF4B-205ENST00000480058 GRAPQ13588 217 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms