RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 INO80BQ9C086 356 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-238ENST00000479894 ZMYND12Q9H0C1 365 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 LTB4R2Q9NPC1 389 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 PRMT8Q9NR22 394 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-238ENST00000479894 NRBP2Q9NSY0 501 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 GABBR1Q9UBS5 961 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 TCEAL9Q9UHQ7 104 aa17.39■□□□□ 0.37
HDLBP-238ENST00000479894 IGLV3-22A0A075B6J6 115 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 FAM170BA6NMN3 283 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 MEIS3P2A8K0S8 358 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 FAM86B1E9PN63 330 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 C2CD2LO14523 706 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 NCAM2O15394 837 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 DDHD2O94830 711 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 FAM86B2P0C5J1 330 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 RPS9P46781 194 aaKnown RBP17.38■□□□□ 0.37
HDLBP-238ENST00000479894 DMWDQ09019 674 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 UBXN2BQ14CS0 331 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 SLC44A4Q53GD3 710 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 TRMT1LQ7Z2T5 733 aaKnown RBP17.38■□□□□ 0.37
HDLBP-238ENST00000479894 GPR65Q8IYL9 337 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 DDX1Q92499 740 aaKnown RBP17.38■□□□□ 0.37
HDLBP-238ENST00000479894 FAM193BQ96PV7 902 aaPredicted RBP17.38■□□□□ 0.37
HDLBP-238ENST00000479894 NELL2Q99435 816 aa17.38■□□□□ 0.37
HDLBP-238ENST00000479894 FASNP49327 2511 aaKnown RBP17.38■□□□□ 0.37
HDLBP-238ENST00000479894 COL4A3Q01955 1670 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 NRP1O14786 923 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 JAK2O60674 1132 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 EFEMP2O95967 443 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 OATP04181 439 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 CYP3A4P08684 503 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 GLUD2P49448 558 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 CLK2P49760 499 aaKnown RBP17.37■□□□□ 0.37
HDLBP-238ENST00000479894 SETQ01105 290 aaPredicted RBP17.37■□□□□ 0.37
HDLBP-238ENST00000479894 COL9A2Q14055 689 aaPredicted RBP17.37■□□□□ 0.37
HDLBP-238ENST00000479894 ZBTB41Q5SVQ8 909 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 MTSS1LQ765P7 747 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 REXO1Q8N1G1 1221 aaKnown RBP17.37■□□□□ 0.37
HDLBP-238ENST00000479894 FGF14Q92915 247 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 ZNF577Q9BSK1 485 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 ANGPTL2Q9UKU9 493 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 RAB23Q9ULC3 237 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 PIN4Q9Y237 131 aaKnown RBP17.37■□□□□ 0.37
HDLBP-238ENST00000479894 CNTNAP2Q9UHC6 1331 aa17.37■□□□□ 0.37
HDLBP-238ENST00000479894 F5P12259 2224 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 H3BQV1 296 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 CSDE1O75534 798 aaKnown RBP17.36■□□□□ 0.37
HDLBP-238ENST00000479894 FDPSP14324 419 aaKnown RBP17.36■□□□□ 0.37
HDLBP-238ENST00000479894 GJB2P29033 226 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 DSG1Q02413 1049 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 LAIR1Q6GTX8 287 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 ZNF410Q86VK4 478 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 DAGLBQ8NCG7 672 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 CRYGNQ8WXF5 182 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 RPP25Q9BUL9 199 aaKnown RBP17.36■□□□□ 0.37
HDLBP-238ENST00000479894 VPS54Q9P1Q0 977 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 PCDHA4Q9UN74 947 aa17.36■□□□□ 0.37
HDLBP-238ENST00000479894 MTF2Q9Y483 593 aaPredicted RBP17.36■□□□□ 0.37
HDLBP-238ENST00000479894 PKD1L2Q7Z442 2459 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 WDR64B1ANS9 1081 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 GAS2O43903 313 aaKnown RBP17.35■□□□□ 0.37
HDLBP-238ENST00000479894 ZNF862O60290 1169 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 FSHRP23945 695 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 NRLP54845 237 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 ST3GAL1Q11201 340 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 GNL2Q13823 731 aaKnown RBP17.35■□□□□ 0.37
HDLBP-238ENST00000479894 TYW1BQ6NUM6 668 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 PARM1Q6UWI2 310 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 AGMOQ6ZNB7 445 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 MRPL10Q7Z7H8 261 aaKnown RBP17.35■□□□□ 0.37
HDLBP-238ENST00000479894 BLIDQ8IZY5 108 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 CELF5Q8N6W0 485 aaKnown RBP17.35■□□□□ 0.37
HDLBP-238ENST00000479894 PHF20Q9BVI0 1012 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 RSAD1Q9HA92 442 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.35■□□□□ 0.37
HDLBP-238ENST00000479894 MARCH5Q9NX47 278 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 CDH7Q9ULB5 785 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 SAMM50Q9Y512 469 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 GREB1Q4ZG55 1949 aa17.35■□□□□ 0.37
HDLBP-238ENST00000479894 A0A087WZ62 844 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 FOXD2O60548 495 aaPredicted RBP17.34■□□□□ 0.37
HDLBP-238ENST00000479894 RETP07949 1114 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 SHC2P98077 582 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 SPEM2Q0P670 501 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 TARBP2Q15633 366 aaKnown RBP17.34■□□□□ 0.37
HDLBP-238ENST00000479894 LARP1BQ659C4 914 aaKnown RBP17.34■□□□□ 0.37
HDLBP-238ENST00000479894 LILRA6Q6PI73 481 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 MAMSTRQ6ZN01 415 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 TAS1R1Q7RTX1 841 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 FBXO18Q8NFZ0 1043 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 NOTCH4Q99466 2003 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 NAP1L4Q99733 375 aaKnown RBP17.34■□□□□ 0.37
HDLBP-238ENST00000479894 FDXACB1Q9BRP7 624 aaPredicted RBP17.34■□□□□ 0.37
HDLBP-238ENST00000479894 CHST7Q9NS84 486 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 FNIP2Q9P278 1114 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 PCDHB2Q9Y5E7 798 aa17.34■□□□□ 0.37
HDLBP-238ENST00000479894 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.34■□□□□ 0.37
HDLBP-238ENST00000479894 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.33■□□□□ 0.36
HDLBP-238ENST00000479894 TGM5O43548 720 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms