RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 CTU1Q7Z7A3 348 aaKnown RBP6.76□□□□□ -1.33
UPF3A-205ENST00000479712 JADE3Q92613 823 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 WNT8AQ9H1J5 351 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 SLC39A2Q9NP94 309 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 HSPBP1Q9NZL4 362 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 ZBTB21Q9ULJ3 1066 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 MYOM3Q5VTT5 1437 aa6.76□□□□□ -1.33
UPF3A-205ENST00000479712 VSTM5A8MXK1 200 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 ZRANB2O95218 330 aaKnown RBP eCLIP6.75□□□□□ -1.33
UPF3A-205ENST00000479712 KRT18P05783 430 aaKnown RBP6.75□□□□□ -1.33
UPF3A-205ENST00000479712 LPLP06858 475 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 ENO2P09104 434 aaPredicted RBP6.75□□□□□ -1.33
UPF3A-205ENST00000479712 MTHFD2P13995 350 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 MAP2K2P36507 400 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 MTNR1BP49286 362 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 MRPS9P82933 396 aaKnown RBP6.75□□□□□ -1.33
UPF3A-205ENST00000479712 ADCY2Q08462 1091 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 HLTFQ14527 1009 aaKnown RBP eCLIP6.75□□□□□ -1.33
UPF3A-205ENST00000479712 MINDY4Q4G0A6 757 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 OLFML2BQ68BL8 750 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 VASNQ6EMK4 673 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 KIAA1841Q6NSI8 718 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 TMC6Q7Z403 805 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 CLIP3Q96DZ5 547 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 RAX2Q96IS3 184 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 ZNF277Q9NRM2 450 aaPredicted RBP6.75□□□□□ -1.33
UPF3A-205ENST00000479712 SLIT3O75094 1523 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 WDR17Q8IZU2 1322 aa6.75□□□□□ -1.33
UPF3A-205ENST00000479712 ZNF839A8K0R7 811 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 MPIG6BO95866 241 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 CHRNA5P30532 468 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 RGS3P49796 1198 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 YBX1P67809 324 aaKnown RBP6.74□□□□□ -1.33
UPF3A-205ENST00000479712 NKX3-2P78367 333 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 ZNF200P98182 395 aaPredicted RBP6.74□□□□□ -1.33
UPF3A-205ENST00000479712 GTF2H3Q13889 308 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 CR1LQ2VPA4 569 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 SLC4A10Q6U841 1118 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 KCNK18Q7Z418 384 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 ZC3H18Q86VM9 953 aaKnown RBP6.74□□□□□ -1.33
UPF3A-205ENST00000479712 IRF2BP1Q8IU81 584 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 CNTROBQ8N137 903 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 CALML6Q8TD86 181 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 AUTS2Q8WXX7 1259 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 LRGUKQ96M69 825 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 AIFM3Q96NN9 605 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 KCTD10Q9H3F6 313 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 NGRNQ9NPE2 291 aaKnown RBP6.74□□□□□ -1.33
UPF3A-205ENST00000479712 INCENPQ9NQS7 918 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 RBPJLQ9UBG7 517 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 PPIP5K1Q6PFW1 1433 aa6.74□□□□□ -1.33
UPF3A-205ENST00000479712 SPTBN5Q9NRC6 3674 aaKnown RBP6.73□□□□□ -1.33
UPF3A-205ENST00000479712 CEP290O15078 2479 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 NFIBO00712 420 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 C5AR1P21730 350 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 LPOP22079 712 aaPredicted RBP6.73□□□□□ -1.33
UPF3A-205ENST00000479712 THBS2P35442 1172 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 SLC5A3P53794 718 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 GP2P55259 537 aaKnown RBP6.73□□□□□ -1.33
UPF3A-205ENST00000479712 PFKPQ01813 784 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 MAP3K12Q12852 859 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 MAP9Q49MG5 647 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 UNQ6494/PRO21346Q6UXR6 183 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 CD300LDQ6UXZ3 194 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 LIPIQ6XZB0 460 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 Q7L0L9 218 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 EPM2AIP1Q7L775 607 aaPredicted RBP6.73□□□□□ -1.33
UPF3A-205ENST00000479712 KANSL1Q7Z3B3 1105 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 ATG4DQ86TL0 474 aaPredicted RBP6.73□□□□□ -1.33
UPF3A-205ENST00000479712 PROSER1Q86XN7 944 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 RPGRQ92834 1020 aaKnown RBP6.73□□□□□ -1.33
UPF3A-205ENST00000479712 SLC2A13Q96QE2 648 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 CSRNP2Q9H175 543 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 TAF1DQ9H5J8 278 aaPredicted RBP6.73□□□□□ -1.33
UPF3A-205ENST00000479712 DDX21Q9NR30 783 aaKnown RBP eCLIP6.73□□□□□ -1.33
UPF3A-205ENST00000479712 OBP2AQ9NY56 170 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 NUMBLQ9Y6R0 609 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 ANKARQ7Z5J8 1434 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 DOT1LQ8TEK3 1739 aa6.73□□□□□ -1.33
UPF3A-205ENST00000479712 PAPPA2Q9BXP8 1791 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 ANKRD30AQ9BXX3 1397 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 HRKO00198 91 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 PLIN1O60240 522 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 GCP02774 474 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 MYL1P05976 194 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 ASGR2P07307 311 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 GLI1P08151 1106 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 PFKMP08237 780 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 LGALS4P56470 323 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 KCNMB1Q16558 191 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 MUM1Q2TAK8 710 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 RRP12Q5JTH9 1297 aaKnown RBP6.72□□□□□ -1.33
UPF3A-205ENST00000479712 IFIT1BQ5T764 474 aaKnown RBP6.72□□□□□ -1.33
UPF3A-205ENST00000479712 LRSAM1Q6UWE0 723 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 TMC5Q6UXY8 1006 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 ZSWIM9Q86XI8 627 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 DGKHQ86XP1 1220 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 MIER2Q8N344 545 aa6.72□□□□□ -1.33
UPF3A-205ENST00000479712 FAM26EQ8N5C1 309 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms