RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 GIT1Q9Y2X7 761 aa17.96■□□□□ 0.47
DDX56-210ENST00000479440 PRR5-ARHGAP8B1AHC4 643 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 LRRN2O75325 713 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 NPEPPSP55786 919 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 GPC5P78333 572 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 ARHGAP8P85298 464 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 SNW1Q13573 536 aaKnown RBP17.95■□□□□ 0.46
DDX56-210ENST00000479440 UBXN2BQ14CS0 331 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 LILRA6Q6PI73 481 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 RSPO2Q6UXX9 243 aaPredicted RBP17.95■□□□□ 0.46
DDX56-210ENST00000479440 Q6ZUG5 572 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 ATRIPQ8WXE1 791 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 FGF14Q92915 247 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 EIF2AQ9BY44 585 aaKnown RBP17.95■□□□□ 0.46
DDX56-210ENST00000479440 DDX25Q9UHL0 483 aaKnown RBP17.95■□□□□ 0.46
DDX56-210ENST00000479440 SMG5Q9UPR3 1016 aaKnown RBP17.95■□□□□ 0.46
DDX56-210ENST00000479440 PATJQ8NI35 1801 aa17.95■□□□□ 0.46
DDX56-210ENST00000479440 SF3B1O75533 1304 aaKnown RBP eCLIP17.95■□□□□ 0.466e-6■■■■■ 53.1
DDX56-210ENST00000479440 EP300Q09472 2414 aaPredicted RBP17.94■□□□□ 0.46
DDX56-210ENST00000479440 MIA3Q5JRA6 1907 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 ZMYM2Q9UBW7 1377 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 DOCK8Q8NF50 2099 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 F8W810 466 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 TSPAN1O60635 241 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 HNRNPA1P09651 372 aaKnown RBP eCLIP17.94■□□□□ 0.46
DDX56-210ENST00000479440 IFNAR1P17181 557 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 CSTF1Q05048 431 aaKnown RBP17.94■□□□□ 0.46
DDX56-210ENST00000479440 EMC2Q15006 297 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 PARM1Q6UWI2 310 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 GRASPQ7Z6J2 395 aaPredicted RBP17.94■□□□□ 0.46
DDX56-210ENST00000479440 B3GALT6Q96L58 329 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 ZFP42Q96MM3 310 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 DDX23Q9BUQ8 820 aaKnown RBP17.94■□□□□ 0.46
DDX56-210ENST00000479440 BMP2KQ9NSY1 1161 aaPredicted RBP17.94■□□□□ 0.46
DDX56-210ENST00000479440 FBXW11Q9UKB1 542 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 PCDHA4Q9UN74 947 aa17.94■□□□□ 0.46
DDX56-210ENST00000479440 XYLBO75191 536 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 KRT37O76014 449 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 HOXA9P31269 272 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 GRIK3Q13003 919 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 PPP2R5CQ13362 524 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 FERMT3Q86UX7 667 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 TRIM22Q8IYM9 498 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 ST13P5Q8NFI4 369 aaPredicted RBP17.93■□□□□ 0.46
DDX56-210ENST00000479440 MTRQ99707 1265 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 APOL6Q9BWW8 343 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 GPR62Q9BZJ7 368 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 CSRNP2Q9H175 543 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 EPC1Q9H2F5 836 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 LTB4R2Q9NPC1 389 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 ZSCAN32Q9NX65 697 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 HES2Q9Y543 173 aa17.93■□□□□ 0.46
DDX56-210ENST00000479440 OTOGLQ3ZCN5 2332 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 FAM170BA6NMN3 283 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 TADA2AO75478 443 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 P4HBP07237 508 aaKnown RBP17.92■□□□□ 0.46
DDX56-210ENST00000479440 RPL17P18621 184 aaKnown RBP17.92■□□□□ 0.46
DDX56-210ENST00000479440 TFDP1Q14186 410 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 MXD4Q14582 209 aaPredicted RBP17.92■□□□□ 0.46
DDX56-210ENST00000479440 NTRK3Q16288 839 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 SLC44A4Q53GD3 710 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 PPM1LQ5SGD2 360 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 BLOC1S2Q6QNY1 142 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 OTUD6AQ7L8S5 288 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 BLIDQ8IZY5 108 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 CPB2Q96IY4 423 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 RTKNQ9BST9 563 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 RPP25Q9BUL9 199 aaKnown RBP17.92■□□□□ 0.46
DDX56-210ENST00000479440 PHF20Q9BVI0 1012 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 SLKQ9H2G2 1235 aaPredicted RBP17.92■□□□□ 0.46
DDX56-210ENST00000479440 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 NXF3Q9H4D5 531 aaKnown RBP17.92■□□□□ 0.46
DDX56-210ENST00000479440 MIOSQ9NXC5 875 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 MYH15Q9Y2K3 1946 aa17.92■□□□□ 0.46
DDX56-210ENST00000479440 INO80B-WBP1J3KQ70 363 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 EML1O00423 815 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 NCAM2O15394 837 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 C8AP07357 584 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 CPA1P15085 419 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 YWHABP31946 246 aaKnown RBP17.91■□□□□ 0.46
DDX56-210ENST00000479440 ATXN1P54253 815 aaKnown RBP17.91■□□□□ 0.46
DDX56-210ENST00000479440 BMP2KLQ5H9B9 411 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 ZBTB41Q5SVQ8 909 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 C4orf19Q8IY42 314 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 ZNF579Q8NAF0 562 aaKnown RBP17.91■□□□□ 0.46
DDX56-210ENST00000479440 ZBTB44Q8NCP5 570 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 FGF13Q92913 245 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 LXNQ9BS40 222 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 GMEB2Q9UKD1 530 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 VAV3Q9UKW4 847 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 USP18Q9UMW8 372 aa17.91■□□□□ 0.46
DDX56-210ENST00000479440 TDRD15B5MCY1 1934 aaKnown RBP17.91■□□□□ 0.46
DDX56-210ENST00000479440 MTCL1Q9Y4B5 1905 aaKnown RBP17.9■□□□□ 0.46
DDX56-210ENST00000479440 SLC37A4O43826 429 aa17.9■□□□□ 0.46
DDX56-210ENST00000479440 TBC1D4O60343 1298 aa17.9■□□□□ 0.46
DDX56-210ENST00000479440 PTENP60484 403 aa17.9■□□□□ 0.46
DDX56-210ENST00000479440 HSP90AA2PQ14568 343 aaPredicted RBP17.9■□□□□ 0.46
DDX56-210ENST00000479440 TPRG1Q6ZUI0 275 aa17.9■□□□□ 0.46
DDX56-210ENST00000479440 IFNLR1Q8IU57 520 aaPredicted RBP17.9■□□□□ 0.46
DDX56-210ENST00000479440 FAM177A1Q8N128 213 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms