RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ENPP1P22413 925 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 ERVK-21P61565 698 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 KIAA2012Q0VF49 1180 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 FSCN1Q16658 493 aaKnown RBP6.71□□□□□ -1.34
CCDC171-207ENST00000478913 CT83Q5H943 113 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 NT5DC1Q5TFE4 455 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 LCNL1Q6ZST4 164 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 BMP8AQ7Z5Y6 402 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 FERMT3Q86UX7 667 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 RTKN2Q8IZC4 609 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 LMBR1Q8WVP7 490 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 AJUBAQ96IF1 538 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 NOL10Q9BSC4 688 aaKnown RBP6.71□□□□□ -1.34
CCDC171-207ENST00000478913 CARD11Q9BXL7 1154 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 KATNBL1Q9H079 304 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 POLR3BQ9NW08 1133 aaPredicted RBP6.71□□□□□ -1.34
CCDC171-207ENST00000478913 MAGEL2Q9UJ55 1249 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 ADAM29Q9UKF5 820 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 SYNPO2Q9UMS6 1093 aa6.71□□□□□ -1.34
CCDC171-207ENST00000478913 SPTBN5Q9NRC6 3674 aaKnown RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 OVOS2A0A0G2JMS6 1433 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 OVOS2A0A0J9YW53 1432 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 OVOS2Q6IE36 1432 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 A0A0A6YYJ9 748 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 SASH1O94885 1247 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 PFKMP08237 780 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 CSF2RBP32927 897 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 STAT5BP51692 787 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 RRADP55042 308 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 KLF1Q13351 362 aaPredicted RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 USP10Q14694 798 aaKnown RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 UGT8Q16880 541 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 BRDTQ58F21 947 aaPredicted RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 SYDE2Q5VT97 1194 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 BORAQ6PGQ7 559 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 GPR155Q7Z3F1 870 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 RALYLQ86SE5 291 aaKnown RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 SIAH1Q8IUQ4 282 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 CDYL2Q8N8U2 506 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 TGFBRAP1Q8WUH2 860 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 DYDC2Q96IM9 177 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 HIST1H2AHQ96KK5 128 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 P2RX7Q99572 595 aaKnown RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 HIST1H2AJQ99878 128 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 CCDC8Q9H0W5 538 aaPredicted RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 TYW1Q9NV66 732 aaKnown RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 USP40Q9NVE5 1235 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 DDX56Q9NY93 547 aaKnown RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 ABT1Q9ULW3 272 aaKnown RBP6.7□□□□□ -1.34
CCDC171-207ENST00000478913 USP18Q9UMW8 372 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 PCDHB6Q9Y5E3 794 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 NUMBLQ9Y6R0 609 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 LMTK2Q8IWU2 1503 aa6.7□□□□□ -1.34
CCDC171-207ENST00000478913 MTUS2Q5JR59 1369 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 MKI67P46013 3256 aaKnown RBP6.69□□□□□ -1.34
CCDC171-207ENST00000478913 NOBOXO60393 691 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 LPLP06858 475 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 ZNF888P0CJ79 500 aaPredicted RBP6.69□□□□□ -1.34
CCDC171-207ENST00000478913 MEOX1P50221 254 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 ANTXR2P58335 489 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 KCTD2Q14681 263 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC171-207ENST00000478913 PITRM1Q5JRX3 1037 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 TCP11L2Q8N4U5 519 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 MARCH10Q8NA82 808 aaPredicted RBP6.69□□□□□ -1.34
CCDC171-207ENST00000478913 SYT8Q8NBV8 401 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC171-207ENST00000478913 EAF2Q96CJ1 260 aaPredicted RBP6.69□□□□□ -1.34
CCDC171-207ENST00000478913 MBD6Q96DN6 1003 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 SMAD5Q99717 465 aaKnown RBP6.69□□□□□ -1.34
CCDC171-207ENST00000478913 PRDM11Q9NQV5 511 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 CFDP1Q9UEE9 299 aaPredicted RBP6.69□□□□□ -1.34
CCDC171-207ENST00000478913 NRAPQ86VF7 1730 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 CASP8AP2Q9UKL3 1982 aa6.69□□□□□ -1.34
CCDC171-207ENST00000478913 PHRF1Q9P1Y6 1649 aaKnown RBP6.68□□□□□ -1.34
CCDC171-207ENST00000478913 RRBP1Q9P2E9 1410 aaKnown RBP6.68□□□□□ -1.34
CCDC171-207ENST00000478913 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
CCDC171-207ENST00000478913 EXOSC10Q01780 885 aaKnown RBP6.68□□□□□ -1.34
CCDC171-207ENST00000478913 PPARAQ07869 468 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 ZNF568Q3ZCX4 644 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 ZMAT1Q5H9K5 638 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 LARP4Q71RC2 724 aaKnown RBP eCLIP6.68□□□□□ -1.34
CCDC171-207ENST00000478913 KBTBD2Q8IY47 623 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 AMOTL1Q8IY63 956 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 BCL6BQ8N143 479 aaPredicted RBP6.68□□□□□ -1.34
CCDC171-207ENST00000478913 GAB3Q8WWW8 586 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 RSAD2Q8WXG1 361 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 CAPNS2Q96L46 248 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 CEP89Q96ST8 783 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 HAPLN2Q9GZV7 340 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 QRSL1Q9H0R6 528 aaKnown RBP6.68□□□□□ -1.34
CCDC171-207ENST00000478913 KCTD10Q9H3F6 313 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 ZCCHC4Q9H5U6 513 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 CCM2LQ9NUG4 571 aaPredicted RBP6.68□□□□□ -1.34
CCDC171-207ENST00000478913 DNAI1Q9UI46 699 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 FAM184BQ9ULE4 1060 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 EDARQ9UNE0 448 aa6.68□□□□□ -1.34
CCDC171-207ENST00000478913 ZNF644Q9H582 1327 aaPredicted RBP6.68□□□□□ -1.34
CCDC171-207ENST00000478913 TOPAZ1Q8N9V7 1692 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms